Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 DDX18P4-201ENST00000511690 1966 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 NXPH1-205ENST00000602349 1953 ntBASIC4.53□□□□□ -1.68
TREX1Q9NSU2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TREX1Q9NSU2 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
TREX1Q9NSU2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 SNORA58B-201ENST00000364259 136 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 SNORA70F-201ENST00000384142 135 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 MIR298-201ENST00000401212 88 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 AL360081.1-201ENST00000428299 555 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 RPL23AP43-201ENST00000446445 471 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 AL645937.3-201ENST00000453647 936 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 AC006967.1-201ENST00000467608 589 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 AC083982.1-201ENST00000485679 344 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 AL121839.1-201ENST00000556233 1185 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 BX323046.1-201ENST00000610145 535 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 AC096586.2-201ENST00000610260 441 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 AC015908.5-201ENST00000623289 343 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.52□□□□□ -1.69
TREX1Q9NSU2 CUL4AP1-201ENST00000514750 1863 ntBASIC4.52□□□□□ -1.69
TREX1Q9NSU2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 RN7SKP106-201ENST00000410832 272 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 AC092570.3-201ENST00000420113 693 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 AC006455.6-201ENST00000426192 893 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 RPL23AP93-201ENST00000440847 484 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 CEACAMP6-201ENST00000452007 574 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 AC010326.1-201ENST00000462726 602 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 RN7SL41P-201ENST00000476144 297 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 AC008897.1-201ENST00000494006 347 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 TCP11X3P-202ENST00000514289 1254 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 snoU109.6-201ENST00000516831 118 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 NPM1P6-201ENST00000521088 871 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 AC026979.4-201ENST00000606555 645 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 AL021707.7-201ENST00000607991 416 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 AC009704.2-201ENST00000618739 483 ntBASIC4.51□□□□□ -1.69
TREX1Q9NSU2 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
TREX1Q9NSU2 NEAT1-202ENST00000501122 22743 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 RNU1-44P-201ENST00000384453 163 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 SNORA74C-2-201ENST00000411179 201 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 EIF4A1P3-201ENST00000411521 244 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AP001324.1-201ENST00000428553 399 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 USP9YP9-201ENST00000429406 715 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 RPL23AP25-201ENST00000430973 463 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AL049745.1-201ENST00000433953 286 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AL357520.1-201ENST00000441557 453 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 RPS27AP15-201ENST00000447672 466 ntBASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.5□□□□□ -1.69
TREX1Q9NSU2 AC012671.1-201ENST00000451912 203 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms