Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.1□□□□□ -1.43
VTA1Q9NP79 TUSC7.1-201ENST00000610969 165 ntBASIC6.1□□□□□ -1.43
VTA1Q9NP79 Mico1.1-201ENST00000611698 204 ntBASIC6.1□□□□□ -1.43
VTA1Q9NP79 AL049539.1-201ENST00000611964 459 ntBASIC6.1□□□□□ -1.43
VTA1Q9NP79 VN1R7P-201ENST00000619242 903 ntBASIC6.1□□□□□ -1.43
VTA1Q9NP79 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.1□□□□□ -1.43
VTA1Q9NP79 MIR1322-201ENST00000638013 71 ntBASIC6.1□□□□□ -1.43
VTA1Q9NP79 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.1□□□□□ -1.43
VTA1Q9NP79 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.1□□□□□ -1.43
VTA1Q9NP79 AC023421.1-201ENST00000590535 1785 ntBASIC6.1□□□□□ -1.43
VTA1Q9NP79 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTA1Q9NP79 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTA1Q9NP79 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTA1Q9NP79 AL355834.1-201ENST00000556602 3965 ntBASIC6.1□□□□□ -1.43
VTA1Q9NP79 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.1□□□□□ -1.43
VTA1Q9NP79 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
VTA1Q9NP79 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTA1Q9NP79 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VTA1Q9NP79 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VTA1Q9NP79 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
VTA1Q9NP79 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VTA1Q9NP79 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VTA1Q9NP79 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VTA1Q9NP79 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 AC016745.2-201ENST00000608834 3443 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 SNORA62.2-201ENST00000364672 152 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 RNU6-413P-201ENST00000384115 107 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 SNORD116-2-201ENST00000384274 95 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 SNORD116-8-201ENST00000384365 95 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 SNORD116-6-201ENST00000384711 96 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 AL109941.1-201ENST00000401925 229 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 ELOCP9-201ENST00000418624 239 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 AL365338.1-201ENST00000422282 858 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 EXTL2P1-201ENST00000446218 416 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 PTENP1-201ENST00000447117 1215 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 AL935212.3-201ENST00000450729 284 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 NPM1P13-201ENST00000452663 865 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 AC096741.1-201ENST00000472250 846 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 AC091959.2-201ENST00000477363 321 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 AC109464.1-201ENST00000511091 819 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 IGKV2D-10-201ENST00000520194 281 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 AC024940.3-201ENST00000538551 316 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 ZNF321P-202ENST00000550843 495 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 AC122134.1-201ENST00000565664 1104 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 AC008088.1-201ENST00000580993 280 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 AP001269.3-201ENST00000588718 329 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 AC004223.2-201ENST00000590309 544 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 LSM1P2-201ENST00000604911 322 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 AL162574.1-201ENST00000615702 950 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 U6.107-201ENST00000637108 79 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 AP003399.1-201ENST00000637534 361 ntBASIC6.09□□□□□ -1.43
VTA1Q9NP79 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VTA1Q9NP79 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
VTA1Q9NP79 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.09□□□□□ -1.43
VTA1Q9NP79 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VTA1Q9NP79 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VTA1Q9NP79 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
VTA1Q9NP79 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
VTA1Q9NP79 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VTA1Q9NP79 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VTA1Q9NP79 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC097461.1-201ENST00000568928 2821 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 MTND4P10-201ENST00000446199 1363 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC103591.2-201ENST00000265259 766 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 ERHP2-201ENST00000402323 299 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 AL079342.2-201ENST00000403367 482 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 RN7SKP222-201ENST00000410651 315 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms