Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RNA5SP392-201ENST00000516905 112 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AC026688.1-201ENST00000520639 1168 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AC022404.1-201ENST00000555320 273 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 SNORA74C-1-201ENST00000580726 201 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 MIR4512-201ENST00000583257 77 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 EIF1P5-201ENST00000585002 234 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 SLC25A36P1-201ENST00000590111 465 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 ABI1P1-201ENST00000603375 1120 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AC104695.2-201ENST00000605056 775 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AC009032.1-201ENST00000617574 431 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AC090527.3-201ENST00000619041 548 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 METTL15-211ENST00000634762 718 ntTSL 5 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AC006453.5-201ENST00000636451 619 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.2□□□□□ -1.9
SND1-IT1Q9HBX3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 VN2R3P-201ENST00000422626 1412 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 HSPD1P14-201ENST00000432666 1618 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 OR52B1P-201ENST00000316506 909 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 RNU1-108P-201ENST00000362556 161 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 MIR921-201ENST00000401133 56 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 VN1R12P-201ENST00000403778 876 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AL136116.2-201ENST00000404020 785 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 IPPKP1-201ENST00000422501 768 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC108075.1-201ENST00000424692 529 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC093414.1-201ENST00000434712 514 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 RPL23AP19-201ENST00000436229 369 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 HMGN1P2-201ENST00000445197 310 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 SUMO2P1-206ENST00000445436 284 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 TCEA1P1-201ENST00000449716 880 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 RPS26P41-201ENST00000450370 284 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC009127.1-201ENST00000467090 155 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 RN7SKP260-201ENST00000516907 149 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 IGKV2D-10-201ENST00000520194 281 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 VTA1P2-201ENST00000520205 911 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC027455.1-201ENST00000574104 594 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 VN1R84P-201ENST00000593697 235 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AL499605.1-201ENST00000604628 403 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC073111.2-201ENST00000605657 1075 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC012557.1-201ENST00000607115 611 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 SNX18P1Y-201ENST00000616231 511 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AP006248.2-201ENST00000623309 592 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AC116563.2-201ENST00000624751 535 ntBASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SND1-IT1Q9HBX3 AL139811.1-201ENST00000424779 2299 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms