Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC068724.3-201ENST00000625906 87 ntBASIC5.57□□□□□ -1.52
RPAP1Q9BWH6 U3.53-201ENST00000628922 216 ntBASIC5.57□□□□□ -1.52
RPAP1Q9BWH6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RPAP1Q9BWH6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.57□□□□□ -1.52
RPAP1Q9BWH6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RPAP1Q9BWH6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.57□□□□□ -1.52
RPAP1Q9BWH6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RPAP1Q9BWH6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 RN7SKP167-201ENST00000411047 285 ntBASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 GAPDHP49-201ENST00000421421 961 ntBASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 AC007016.1-201ENST00000512110 244 ntBASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 AC023575.1-201ENST00000580510 358 ntBASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 AL353600.1-201ENST00000608148 251 ntBASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 AL132656.3-201ENST00000606384 1595 ntBASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RPAP1Q9BWH6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 MIR921-201ENST00000401133 56 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 MIR1193-201ENST00000408109 78 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 RANP7-201ENST00000418085 644 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 RPL21P43-201ENST00000425440 472 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 SEPT7P3-201ENST00000455017 621 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 RPL23AP24-201ENST00000458203 385 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 SCARNA10-201ENST00000459255 330 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 OR51H2P-202ENST00000641424 3046 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 AC021146.4-201ENST00000309229 279 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 AL445213.1-201ENST00000412589 747 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 NDUFA5P1-201ENST00000433858 341 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 CBX1P1-201ENST00000440184 427 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 RN7SL817P-201ENST00000480777 288 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 MIR1254-2-201ENST00000579553 63 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 AC069366.1-201ENST00000583159 838 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 AC090948.1-201ENST00000607464 549 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 AL133243.1-201ENST00000614487 366 ntBASIC5.55□□□□□ -1.52
RPAP1Q9BWH6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 RN7SKP199-201ENST00000410325 305 ntBASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 AC239367.2-201ENST00000447309 705 ntBASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 RPL7AP28-201ENST00000464513 571 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms