Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC004948.1-201ENST00000609858 672 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC015871.5-202ENST00000623252 701 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC007529.1-201ENST00000418574 2178 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC134882.1-201ENST00000603738 1676 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VMP1Q96GC9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VMP1Q96GC9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VMP1Q96GC9 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VMP1Q96GC9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VMP1Q96GC9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VMP1Q96GC9 AL353692.2-201ENST00000407054 335 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 LINC01347-201ENST00000417964 355 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC004690.1-201ENST00000418216 328 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 RPL7P29-201ENST00000437151 728 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC007000.2-201ENST00000442564 487 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC006326.1-201ENST00000445465 787 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 RN7SL423P-201ENST00000486202 304 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 YWHABP2-201ENST00000540201 713 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 BNIP3P1-201ENST00000547295 580 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VMP1Q96GC9 OR11H3P-201ENST00000554547 982 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VMP1Q96GC9 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 HMGB2P1-201ENST00000591146 634 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC069307.1-201ENST00000602820 447 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC108738.1-201ENST00000603703 237 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC005252.1-201ENST00000604518 1063 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC004775.1-201ENST00000607389 753 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 AP000843.1-201ENST00000624880 701 ntBASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VMP1Q96GC9 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VMP1Q96GC9 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VMP1Q96GC9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VMP1Q96GC9 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VMP1Q96GC9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 METTL21EP-201ENST00000298105 713 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VMP1Q96GC9 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 RNU6-98P-201ENST00000384173 107 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 RNU6-171P-201ENST00000384354 107 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 MIR105-1-201ENST00000385222 81 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 MIR1178-201ENST00000408396 91 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 OR52B5P-201ENST00000435337 951 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 ACTR3P2-201ENST00000439585 1257 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 S100A11P1-201ENST00000477525 312 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 RPL7P6-201ENST00000480903 738 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 FTH1P24-201ENST00000503502 462 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 HIGD1AP14-201ENST00000507617 282 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 SCARNA20.4-201ENST00000516969 131 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 AL161713.1-201ENST00000555538 145 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 AC233266.2-201ENST00000567067 528 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.97□□□□□ -1.61
VMP1Q96GC9 AC135178.6-201ENST00000605314 398 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 AC003001.2-201ENST00000616294 831 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 AL035461.2-201ENST00000619201 524 ntBASIC4.97□□□□□ -1.61
VMP1Q96GC9 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms