Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
ATP2A3Q93084 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.49□□□□□ -1.53
ATP2A3Q93084 SMG1P4-204ENST00000523028 4131 ntBASIC5.49□□□□□ -1.53
ATP2A3Q93084 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.49□□□□□ -1.53
ATP2A3Q93084 AC023421.1-201ENST00000590535 1785 ntBASIC5.49□□□□□ -1.53
ATP2A3Q93084 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATP2A3Q93084 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
ATP2A3Q93084 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATP2A3Q93084 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATP2A3Q93084 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.49□□□□□ -1.53
ATP2A3Q93084 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
ATP2A3Q93084 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 AC079298.1-201ENST00000625026 1619 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AL603750.1-201ENST00000624216 1717 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2A3Q93084 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2A3Q93084 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2A3Q93084 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AC103591.2-201ENST00000265259 766 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 RNU4-4P-201ENST00000364588 130 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 OR1L6-202ENST00000373684 1044 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 HMGB1P10-201ENST00000395823 563 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 CHMP1B2P-201ENST00000399581 597 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 AL109941.1-201ENST00000401925 229 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 HMGB3P19-201ENST00000403971 560 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 RBMY2KP-201ENST00000418221 992 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 HSPD1P12-201ENST00000429127 1069 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AC090018.1-201ENST00000434369 367 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AC098826.2-201ENST00000452011 651 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 AC090114.3-201ENST00000479267 829 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 TPT1P3-201ENST00000492841 512 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AC108120.2-201ENST00000512973 294 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 HMGN1P9-201ENST00000515212 298 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 SCARNA20.4-201ENST00000516969 131 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2A3Q93084 OR1F2P-201ENST00000570470 933 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 MIR4436B2-201ENST00000581415 91 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 MIR4436B1-201ENST00000583272 91 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 AC006116.5-201ENST00000591936 559 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AP001784.1-201ENST00000624107 428 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 FRG1EP-201ENST00000634469 770 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 AL590396.4-201ENST00000636779 956 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2A3Q93084 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2A3Q93084 MTND5P11-201ENST00000511037 1812 ntBASIC5.48□□□□□ -1.53
ATP2A3Q93084 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2A3Q93084 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
ATP2A3Q93084 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2A3Q93084 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATP2A3Q93084 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATP2A3Q93084 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATP2A3Q93084 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATP2A3Q93084 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATP2A3Q93084 HSPA8P14-201ENST00000552265 1805 ntBASIC5.47□□□□□ -1.53
ATP2A3Q93084 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATP2A3Q93084 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATP2A3Q93084 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATP2A3Q93084 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATP2A3Q93084 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATP2A3Q93084 RNU6-468P-201ENST00000384003 109 ntBASIC5.47□□□□□ -1.53
ATP2A3Q93084 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.47□□□□□ -1.53
ATP2A3Q93084 PTP4A1P7-201ENST00000423476 514 ntBASIC5.47□□□□□ -1.53
ATP2A3Q93084 USP12PY-201ENST00000427677 1064 ntBASIC5.47□□□□□ -1.53
ATP2A3Q93084 RBMY2QP-201ENST00000429799 1147 ntBASIC5.47□□□□□ -1.53
ATP2A3Q93084 MTCO1P43-201ENST00000431831 488 ntBASIC5.47□□□□□ -1.53
ATP2A3Q93084 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.47□□□□□ -1.53
ATP2A3Q93084 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.47□□□□□ -1.53
ATP2A3Q93084 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATP2A3Q93084 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.47□□□□□ -1.53
ATP2A3Q93084 AC104634.1-201ENST00000452720 462 ntBASIC5.47□□□□□ -1.53
ATP2A3Q93084 AL354710.1-201ENST00000453641 246 ntBASIC5.47□□□□□ -1.53
ATP2A3Q93084 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.47□□□□□ -1.53
ATP2A3Q93084 HIGD1AP8-201ENST00000453927 274 ntBASIC5.47□□□□□ -1.53
ATP2A3Q93084 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ATP2A3Q93084 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms