Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 Z74021.1-201ENST00000423610 407 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 Z80107.2-201ENST00000445127 392 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 H2AFZP5-201ENST00000446960 382 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 NDUFS5P3-201ENST00000450668 321 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 HIGD1AP8-201ENST00000453927 274 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 AC063943.1-201ENST00000465434 453 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 RN7SL329P-201ENST00000467740 299 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 DEFB109F-201ENST00000491870 277 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 RNU6-943P-201ENST00000516960 98 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 GSTP1P1-201ENST00000548078 319 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 SNORD39.2-201ENST00000579995 76 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 MIR3667-201ENST00000581025 74 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 OR7A19P-201ENST00000608051 733 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 AC244517.3-201ENST00000616254 1235 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 AL158196.1-201ENST00000616786 434 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF439Q8NDP4 AL136164.3-201ENST00000624429 3978 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 ATG4AP1-201ENST00000416893 538 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 BX510359.2-201ENST00000417920 305 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AC099336.2-201ENST00000422457 254 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 RPS12P5-201ENST00000423449 371 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 RPL21P43-201ENST00000425440 472 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 MTCO1P51-201ENST00000427672 1060 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 RPS20P1-201ENST00000434853 354 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 RPL31P44-201ENST00000447680 377 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 EIF4A1P11-201ENST00000451239 222 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AC099560.2-201ENST00000457554 255 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 RPL36AP41-201ENST00000493820 306 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 RPS4XP18-201ENST00000495480 763 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AK4P6-201ENST00000505168 528 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AL110118.1-201ENST00000553543 400 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 GLRXP2-201ENST00000555594 321 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 RPL21P7-201ENST00000557463 483 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AC044860.2-201ENST00000561005 179 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 MIR4737-201ENST00000583979 81 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 RPL26P30-202ENST00000602923 645 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AL512782.1-201ENST00000603093 364 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AL031320.1-201ENST00000604177 357 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AC009237.17-201ENST00000618111 748 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 AC067931.1-201ENST00000624190 671 ntBASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF439Q8NDP4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 HSPD1P11-201ENST00000508643 1702 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AC135352.1-201ENST00000506173 1418 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 CR383656.5-201ENST00000547616 1340 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AL645733.1-201ENST00000402250 217 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AL121834.1-202ENST00000404494 277 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AL139039.2-201ENST00000407436 479 ntBASIC3.81□□□□□ -1.8
ZNF439Q8NDP4 AL603766.1-201ENST00000407763 664 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms