Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 MTCYBP22-201ENST00000603788 447 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AL513477.2-201ENST00000607858 568 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AL031658.2-201ENST00000616850 651 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AC087516.1-201ENST00000561236 2428 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 AP002512.4-202ENST00000641599 4530 ntBASIC5.86□□□□□ -1.47
TRIM48Q8IWZ4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 ICE2P1-201ENST00000512800 1849 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 RNA5SP122-201ENST00000384457 108 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 RNU6-1263P-201ENST00000384601 106 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 RPS15AP38-201ENST00000413110 372 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 Z99497.1-201ENST00000421282 135 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC104651.1-201ENST00000427559 735 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 RPS29P14-201ENST00000431518 171 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC008072.1-201ENST00000434254 824 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 RPL31P44-201ENST00000447680 377 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 TPT1P7-201ENST00000458300 517 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 RPL7P48-201ENST00000461513 746 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AL122020.1-201ENST00000472287 459 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC116337.2-201ENST00000477662 156 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC104687.1-201ENST00000485829 412 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 RN7SL193P-201ENST00000491708 276 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC008629.2-201ENST00000503783 483 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC093815.1-201ENST00000508637 280 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 IGKV2-19-201ENST00000518132 283 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 CCNG2P1-201ENST00000549521 1000 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 SS18L2P2-201ENST00000583960 235 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC008521.2-201ENST00000591021 259 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 FAM27E4-201ENST00000605259 342 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC090525.3-201ENST00000605601 189 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC092354.1-201ENST00000606057 376 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC124312.6-202ENST00000623624 418 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC018628.1-201ENST00000624147 3819 ntBASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
TRIM48Q8IWZ4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 Z99496.1-201ENST00000469424 1477 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AL121657.1-201ENST00000327215 531 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms