Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 RPL34P20-201ENST00000442771 351 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 TRY2P-201ENST00000448860 689 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AL645937.3-201ENST00000453647 936 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 HMGB1P4-201ENST00000455362 567 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC108161.1-201ENST00000461060 402 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 SETP6-201ENST00000479329 568 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 RN7SL244P-201ENST00000493405 297 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 IGKV2D-10-201ENST00000520194 281 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC100784.1-201ENST00000522790 310 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AP001922.4-201ENST00000526967 290 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC008033.2-201ENST00000542626 177 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC106785.3-201ENST00000564064 847 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC016542.1-201ENST00000608259 493 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AL049539.1-201ENST00000611964 459 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 EIF3FP1-201ENST00000613970 806 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 MIR8084-201ENST00000614105 89 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 uc_338.9-201ENST00000617424 182 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
SNX30Q5VWJ9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SNX30Q5VWJ9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SNX30Q5VWJ9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SNX30Q5VWJ9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.34□□□□□ -1.56
SNX30Q5VWJ9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.34□□□□□ -1.56
SNX30Q5VWJ9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC011447.7-201ENST00000624228 1590 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AL592494.2-201ENST00000425455 1548 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC053481.2-202ENST00000582394 1500 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 RNU6-304P-201ENST00000364855 107 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 UBBP2-201ENST00000376781 231 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AL158050.1-201ENST00000416077 457 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 MTCO3P4-201ENST00000419236 787 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 RHOT1P3-201ENST00000436571 331 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 GTF3AP5-201ENST00000442645 697 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AL354714.3-201ENST00000447284 493 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 RPL10P17-201ENST00000453852 316 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC104687.1-201ENST00000485829 412 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 PCNPP1-201ENST00000552501 511 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC119501.1-201ENST00000603646 475 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC004948.1-201ENST00000609858 672 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AP000943.4-201ENST00000622912 357 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC083865.1-201ENST00000636634 831 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms