Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC3.91□□□□□ -1.78
LRRK2Q5S007 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC3.91□□□□□ -1.78
LRRK2Q5S007 AL606490.9-201ENST00000603331 271 ntBASIC3.91□□□□□ -1.78
LRRK2Q5S007 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRRK2Q5S007 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRRK2Q5S007 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRRK2Q5S007 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
LRRK2Q5S007 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRRK2Q5S007 ICE2P1-201ENST00000512800 1849 ntBASIC3.91□□□□□ -1.78
LRRK2Q5S007 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LRRK2Q5S007 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LRRK2Q5S007 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRRK2Q5S007 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRRK2Q5S007 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRRK2Q5S007 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRRK2Q5S007 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRRK2Q5S007 AC008033.1-201ENST00000216407 1162 ntBASIC3.91□□□□□ -1.78
LRRK2Q5S007 AP000580.1-201ENST00000404439 358 ntBASIC3.91□□□□□ -1.78
LRRK2Q5S007 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.91□□□□□ -1.78
LRRK2Q5S007 RN7SKP159-201ENST00000410657 292 ntBASIC3.91□□□□□ -1.78
LRRK2Q5S007 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.91□□□□□ -1.78
LRRK2Q5S007 AC022336.1-201ENST00000475510 337 ntBASIC3.91□□□□□ -1.78
LRRK2Q5S007 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.91□□□□□ -1.78
LRRK2Q5S007 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.91□□□□□ -1.78
LRRK2Q5S007 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRRK2Q5S007 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.91□□□□□ -1.78
LRRK2Q5S007 AC005000.2-201ENST00000605468 310 ntBASIC3.91□□□□□ -1.78
LRRK2Q5S007 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRRK2Q5S007 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.91□□□□□ -1.78
LRRK2Q5S007 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.91□□□□□ -1.78
LRRK2Q5S007 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRRK2Q5S007 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRRK2Q5S007 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
LRRK2Q5S007 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRRK2Q5S007 RNA5SP72-201ENST00000364442 117 ntBASIC3.9□□□□□ -1.78
LRRK2Q5S007 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.9□□□□□ -1.78
LRRK2Q5S007 RNA5SP246-201ENST00000458909 119 ntBASIC3.9□□□□□ -1.78
LRRK2Q5S007 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.9□□□□□ -1.78
LRRK2Q5S007 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.9□□□□□ -1.78
LRRK2Q5S007 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.9□□□□□ -1.78
LRRK2Q5S007 AL159169.3-201ENST00000608871 561 ntBASIC3.9□□□□□ -1.78
LRRK2Q5S007 AL354798.1-201ENST00000622505 329 ntBASIC3.9□□□□□ -1.78
LRRK2Q5S007 AC011815.3-201ENST00000624194 473 ntBASIC3.9□□□□□ -1.78
LRRK2Q5S007 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LRRK2Q5S007 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRRK2Q5S007 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LRRK2Q5S007 AC027228.2-201ENST00000567141 2154 ntBASIC3.9□□□□□ -1.78
LRRK2Q5S007 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LRRK2Q5S007 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.9□□□□□ -1.79
LRRK2Q5S007 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
LRRK2Q5S007 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
LRRK2Q5S007 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
LRRK2Q5S007 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRRK2Q5S007 RPL6P29-201ENST00000414863 865 ntBASIC3.9□□□□□ -1.79
LRRK2Q5S007 AL390879.2-203ENST00000426943 1121 ntBASIC3.9□□□□□ -1.79
LRRK2Q5S007 RPL23AP52-201ENST00000439311 478 ntBASIC3.9□□□□□ -1.79
LRRK2Q5S007 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRK2Q5S007 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRK2Q5S007 AC079064.1-201ENST00000528365 362 ntBASIC3.9□□□□□ -1.79
LRRK2Q5S007 TRAV8-5-201ENST00000537369 341 ntBASIC3.9□□□□□ -1.79
LRRK2Q5S007 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC3.9□□□□□ -1.79
LRRK2Q5S007 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRK2Q5S007 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.9□□□□□ -1.79
LRRK2Q5S007 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRRK2Q5S007 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
LRRK2Q5S007 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRRK2Q5S007 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRK2Q5S007 MTND5P1-201ENST00000445440 1375 ntBASIC3.9□□□□□ -1.79
LRRK2Q5S007 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 AL158163.1-201ENST00000603915 1649 ntBASIC3.89□□□□□ -1.79
LRRK2Q5S007 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 RNA5SP223-201ENST00000365174 120 ntBASIC3.89□□□□□ -1.79
LRRK2Q5S007 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 AC068533.1-201ENST00000418542 415 ntBASIC3.89□□□□□ -1.79
LRRK2Q5S007 ANAPC1P1-201ENST00000426186 2145 ntBASIC3.89□□□□□ -1.79
LRRK2Q5S007 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 RPS29P7-201ENST00000439662 171 ntBASIC3.89□□□□□ -1.79
LRRK2Q5S007 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRRK2Q5S007 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 OR8Q1P-201ENST00000526467 655 ntBASIC3.89□□□□□ -1.79
LRRK2Q5S007 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 AC116553.2-201ENST00000564203 463 ntBASIC3.89□□□□□ -1.79
LRRK2Q5S007 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRRK2Q5S007 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRRK2Q5S007 AC007382.1-201ENST00000624376 2618 ntBASIC3.89□□□□□ -1.79
LRRK2Q5S007 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRRK2Q5S007 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRRK2Q5S007 SOCS5P3-201ENST00000425115 1576 ntBASIC3.89□□□□□ -1.79
LRRK2Q5S007 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 AC011447.7-201ENST00000624228 1590 ntBASIC3.89□□□□□ -1.79
LRRK2Q5S007 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRK2Q5S007 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRRK2Q5S007 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRRK2Q5S007 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms