Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
YBX1P67809 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.93□□□□□ -1.46
YBX1P67809 METTL21EP-201ENST00000298105 713 ntBASIC5.93□□□□□ -1.46
YBX1P67809 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 SNORA4.1-201ENST00000364263 144 ntBASIC5.93□□□□□ -1.46
YBX1P67809 RNU5A-6P-201ENST00000384136 116 ntBASIC5.93□□□□□ -1.46
YBX1P67809 RN7SKP151-201ENST00000410230 316 ntBASIC5.93□□□□□ -1.46
YBX1P67809 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.93□□□□□ -1.46
YBX1P67809 AC019050.1-201ENST00000418508 492 ntBASIC5.93□□□□□ -1.46
YBX1P67809 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.93□□□□□ -1.46
YBX1P67809 BTF3P10-201ENST00000433415 495 ntBASIC5.93□□□□□ -1.46
YBX1P67809 USP24P1-201ENST00000433802 779 ntBASIC5.93□□□□□ -1.46
YBX1P67809 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.93□□□□□ -1.46
YBX1P67809 AC079922.1-201ENST00000443291 359 ntBASIC5.93□□□□□ -1.46
YBX1P67809 HMGB1P16-201ENST00000447155 540 ntBASIC5.93□□□□□ -1.46
YBX1P67809 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.93□□□□□ -1.46
YBX1P67809 RPL23AP35-201ENST00000451906 501 ntBASIC5.93□□□□□ -1.46
YBX1P67809 PPIAP7-201ENST00000454070 489 ntBASIC5.93□□□□□ -1.46
YBX1P67809 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.93□□□□□ -1.46
YBX1P67809 MTCO3P11-201ENST00000455103 774 ntBASIC5.93□□□□□ -1.46
YBX1P67809 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.93□□□□□ -1.46
YBX1P67809 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 KLF3P2-201ENST00000465138 268 ntBASIC5.93□□□□□ -1.46
YBX1P67809 RPS3AP17-201ENST00000472594 777 ntBASIC5.93□□□□□ -1.46
YBX1P67809 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.93□□□□□ -1.46
YBX1P67809 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.93□□□□□ -1.46
YBX1P67809 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.93□□□□□ -1.46
YBX1P67809 AP000620.1-201ENST00000527147 504 ntBASIC5.93□□□□□ -1.46
YBX1P67809 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.93□□□□□ -1.46
YBX1P67809 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.93□□□□□ -1.46
YBX1P67809 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.93□□□□□ -1.46
YBX1P67809 AC124947.2-202ENST00000552735 133 ntBASIC5.93□□□□□ -1.46
YBX1P67809 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.93□□□□□ -1.46
YBX1P67809 AC090616.5-202ENST00000582111 297 ntBASIC5.93□□□□□ -1.46
YBX1P67809 AC020916.2-201ENST00000591242 360 ntBASIC5.93□□□□□ -1.46
YBX1P67809 AP001823.1-201ENST00000604056 1003 ntBASIC5.93□□□□□ -1.46
YBX1P67809 AC090578.1-201ENST00000604955 591 ntBASIC5.93□□□□□ -1.46
YBX1P67809 AL390208.1-201ENST00000605885 644 ntBASIC5.93□□□□□ -1.46
YBX1P67809 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 AL512652.1-201ENST00000619006 500 ntBASIC5.93□□□□□ -1.46
YBX1P67809 AC022400.9-201ENST00000623633 273 ntBASIC5.93□□□□□ -1.46
YBX1P67809 AC011815.3-201ENST00000624194 473 ntBASIC5.93□□□□□ -1.46
YBX1P67809 AP001052.1-201ENST00000626421 99 ntBASIC5.93□□□□□ -1.46
YBX1P67809 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
YBX1P67809 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.93□□□□□ -1.46
YBX1P67809 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 DDX18P6-201ENST00000450119 1997 ntBASIC5.93□□□□□ -1.46
YBX1P67809 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
YBX1P67809 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.93□□□□□ -1.46
YBX1P67809 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
YBX1P67809 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
YBX1P67809 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.93□□□□□ -1.46
YBX1P67809 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.92□□□□□ -1.46
YBX1P67809 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.92□□□□□ -1.46
YBX1P67809 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
YBX1P67809 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.92□□□□□ -1.46
YBX1P67809 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
YBX1P67809 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.92□□□□□ -1.46
YBX1P67809 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
YBX1P67809 AL033543.1-201ENST00000623440 13454 ntBASIC5.92□□□□□ -1.46
YBX1P67809 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
YBX1P67809 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
YBX1P67809 ZNF680P1-201ENST00000436625 1469 ntBASIC5.92□□□□□ -1.46
YBX1P67809 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
YBX1P67809 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
YBX1P67809 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.92□□□□□ -1.46
YBX1P67809 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
YBX1P67809 AC008033.1-201ENST00000216407 1162 ntBASIC5.92□□□□□ -1.46
YBX1P67809 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
YBX1P67809 RN7SKP226-201ENST00000364912 300 ntBASIC5.92□□□□□ -1.46
YBX1P67809 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.92□□□□□ -1.46
YBX1P67809 Y_RNA.582-201ENST00000391023 95 ntBASIC5.92□□□□□ -1.46
YBX1P67809 RPL23AP17-201ENST00000401064 499 ntBASIC5.92□□□□□ -1.46
YBX1P67809 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.92□□□□□ -1.46
YBX1P67809 RPL23AP39-201ENST00000415533 405 ntBASIC5.92□□□□□ -1.46
YBX1P67809 RPL7AP14-201ENST00000424041 802 ntBASIC5.92□□□□□ -1.46
YBX1P67809 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.92□□□□□ -1.46
YBX1P67809 PNKDP1-201ENST00000435914 430 ntBASIC5.92□□□□□ -1.46
YBX1P67809 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.92□□□□□ -1.46
YBX1P67809 AL353662.1-201ENST00000439099 327 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms