Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC091953.3-201ENST00000623220 236 ntBASIC4.77□□□□□ -1.65
CDH6P55285 AP001784.1-201ENST00000624107 428 ntBASIC4.77□□□□□ -1.65
CDH6P55285 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
CDH6P55285 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.77□□□□□ -1.65
CDH6P55285 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH6P55285 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH6P55285 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH6P55285 AP001002.1-201ENST00000625148 1513 ntBASIC4.77□□□□□ -1.65
CDH6P55285 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH6P55285 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH6P55285 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDH6P55285 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH6P55285 ZNF137P-201ENST00000456718 1920 ntBASIC4.76□□□□□ -1.65
CDH6P55285 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH6P55285 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CDH6P55285 SNORA71.2-201ENST00000364941 134 ntBASIC4.76□□□□□ -1.65
CDH6P55285 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH6P55285 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDH6P55285 RPL5P19-201ENST00000404228 893 ntBASIC4.76□□□□□ -1.65
CDH6P55285 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH6P55285 AL590609.2-201ENST00000421430 368 ntBASIC4.76□□□□□ -1.65
CDH6P55285 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH6P55285 RPL21P91-201ENST00000429231 479 ntBASIC4.76□□□□□ -1.65
CDH6P55285 USP9YP9-201ENST00000429406 715 ntBASIC4.76□□□□□ -1.65
CDH6P55285 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH6P55285 AL772161.1-201ENST00000439130 476 ntBASIC4.76□□□□□ -1.65
CDH6P55285 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH6P55285 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CDH6P55285 AC007016.1-201ENST00000512110 244 ntBASIC4.76□□□□□ -1.65
CDH6P55285 RNA5SP446-201ENST00000515955 82 ntBASIC4.76□□□□□ -1.65
CDH6P55285 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.76□□□□□ -1.65
CDH6P55285 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH6P55285 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH6P55285 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH6P55285 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH6P55285 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH6P55285 HMGB2P1-201ENST00000591146 634 ntBASIC4.76□□□□□ -1.65
CDH6P55285 AC024940.4-201ENST00000605507 246 ntBASIC4.76□□□□□ -1.65
CDH6P55285 AC004241.3-201ENST00000611728 517 ntBASIC4.76□□□□□ -1.65
CDH6P55285 AC140113.4-201ENST00000622087 222 ntBASIC4.76□□□□□ -1.65
CDH6P55285 MIR6730-201ENST00000622213 67 ntBASIC4.76□□□□□ -1.65
CDH6P55285 AC004232.3-201ENST00000622977 525 ntBASIC4.76□□□□□ -1.65
CDH6P55285 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.76□□□□□ -1.65
CDH6P55285 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH6P55285 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH6P55285 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH6P55285 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CDH6P55285 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH6P55285 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDH6P55285 VPS35P1-201ENST00000563400 1518 ntBASIC4.76□□□□□ -1.65
CDH6P55285 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH6P55285 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH6P55285 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH6P55285 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH6P55285 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH6P55285 DDX18P3-201ENST00000404856 2007 ntBASIC4.75□□□□□ -1.65
CDH6P55285 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH6P55285 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH6P55285 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
CDH6P55285 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH6P55285 LINC01355-201ENST00000566551 5444 ntBASIC4.75□□□□□ -1.65
CDH6P55285 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH6P55285 AL450326.2-201ENST00000421913 1962 ntBASIC4.75□□□□□ -1.65
CDH6P55285 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH6P55285 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CDH6P55285 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH6P55285 RN7SKP103-201ENST00000363848 320 ntBASIC4.75□□□□□ -1.65
CDH6P55285 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH6P55285 MIR195-201ENST00000385194 87 ntBASIC4.75□□□□□ -1.65
CDH6P55285 RNA5SP105-201ENST00000391123 113 ntBASIC4.75□□□□□ -1.65
CDH6P55285 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH6P55285 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH6P55285 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH6P55285 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH6P55285 RPL35AP28-201ENST00000459730 331 ntBASIC4.75□□□□□ -1.65
CDH6P55285 MTND4LP2-201ENST00000502312 285 ntBASIC4.75□□□□□ -1.65
CDH6P55285 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH6P55285 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH6P55285 OR5M2P-201ENST00000529003 936 ntBASIC4.75□□□□□ -1.65
CDH6P55285 CYCSP28-201ENST00000534284 321 ntBASIC4.75□□□□□ -1.65
CDH6P55285 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH6P55285 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH6P55285 ATP5J2P6-201ENST00000565203 266 ntBASIC4.75□□□□□ -1.65
CDH6P55285 AC027455.1-201ENST00000574104 594 ntBASIC4.75□□□□□ -1.65
CDH6P55285 MIR4270-201ENST00000581799 70 ntBASIC4.75□□□□□ -1.65
CDH6P55285 ADAD1P2-201ENST00000588476 646 ntBASIC4.75□□□□□ -1.65
CDH6P55285 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.75□□□□□ -1.65
CDH6P55285 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.75□□□□□ -1.65
CDH6P55285 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH6P55285 AP002967.1-201ENST00000624203 539 ntBASIC4.75□□□□□ -1.65
CDH6P55285 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH6P55285 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH6P55285 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH6P55285 EOGT-210ENST00000615922 1931 ntBASIC4.75□□□□□ -1.65
CDH6P55285 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CDH6P55285 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH6P55285 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH6P55285 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH6P55285 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CDH6P55285 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms