Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AL359757.1-201ENST00000623176 255 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.1□□□□□ -1.59
LIMK1P53667 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LIMK1P53667 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK1P53667 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK1P53667 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
LIMK1P53667 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK1P53667 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK1P53667 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK1P53667 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMK1P53667 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LIMK1P53667 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMK1P53667 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIMK1P53667 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIMK1P53667 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LIMK1P53667 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIMK1P53667 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LIMK1P53667 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMK1P53667 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMK1P53667 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.09□□□□□ -1.59
LIMK1P53667 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
LIMK1P53667 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.09□□□□□ -1.59
LIMK1P53667 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LIMK1P53667 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
LIMK1P53667 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LIMK1P53667 RNA5SP388-201ENST00000362584 119 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 RNA5SP326-201ENST00000363209 110 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 RNA5SP479-201ENST00000364858 117 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 RNU6-31P-201ENST00000384388 108 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 U3.28-201ENST00000391249 210 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 Z86062.1-201ENST00000406773 777 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 MIR1193-201ENST00000408109 78 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AC019070.1-201ENST00000415008 1024 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIMK1P53667 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMK1P53667 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.09□□□□□ -1.59
LIMK1P53667 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.09□□□□□ -1.59
LIMK1P53667 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.09□□□□□ -1.59
LIMK1P53667 AC006326.1-201ENST00000445465 787 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AC090804.1-201ENST00000448870 490 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.09□□□□□ -1.59
LIMK1P53667 HMGB1P4-201ENST00000455362 567 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AC079168.1-201ENST00000458741 345 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AC010627.1-201ENST00000503819 1294 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AC021106.1-201ENST00000509020 1058 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.09□□□□□ -1.59
LIMK1P53667 SMARCE1P4-201ENST00000523647 241 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.09□□□□□ -1.59
LIMK1P53667 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.09□□□□□ -1.59
LIMK1P53667 OR5AM1P-201ENST00000532136 1032 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.09□□□□□ -1.59
LIMK1P53667 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMK1P53667 MTCYBP13-201ENST00000578634 1093 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.09□□□□□ -1.59
LIMK1P53667 AL512782.1-201ENST00000603093 364 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AC015849.2-201ENST00000605738 409 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AL450270.1-201ENST00000606160 391 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AL392048.1-201ENST00000613946 534 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.09□□□□□ -1.59
LIMK1P53667 AC006213.5-201ENST00000619673 288 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
LIMK1P53667 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIMK1P53667 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.09□□□□□ -1.59
LIMK1P53667 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMK1P53667 LINC01109-201ENST00000603837 3081 ntBASIC5.09□□□□□ -1.6
LIMK1P53667 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
LIMK1P53667 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.6
LIMK1P53667 AC025574.1-201ENST00000554784 1653 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LIMK1P53667 CYP1D1P-201ENST00000416662 1433 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 AC000123.3-201ENST00000624029 4975 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 AL359715.3-201ENST00000569267 2123 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK1P53667 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMK1P53667 OR4F13P-202ENST00000560066 2054 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.08□□□□□ -1.6
LIMK1P53667 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LIMK1P53667 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK1P53667 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LIMK1P53667 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK1P53667 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LIMK1P53667 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK1P53667 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LIMK1P53667 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LIMK1P53667 AL121886.1-201ENST00000358609 435 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK1P53667 RNA5SP241-201ENST00000391326 114 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK1P53667 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK1P53667 DBIP1-201ENST00000401435 260 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 RN7SKP100-201ENST00000411258 284 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.08□□□□□ -1.6
LIMK1P53667 AC004690.1-201ENST00000418216 328 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK1P53667 AC004975.1-201ENST00000428733 208 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 RPL12P28-201ENST00000430852 489 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK1P53667 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK1P53667 PTP4A1P3-201ENST00000433661 420 ntBASIC5.08□□□□□ -1.6
LIMK1P53667 XKRY2-201ENST00000442362 1093 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms