Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 snoZ278.1-201ENST00000517059 112 ntBASIC5.63□□□□□ -1.51
NEK3P51956 IGLV3-24-201ENST00000517477 197 ntBASIC5.63□□□□□ -1.51
NEK3P51956 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.63□□□□□ -1.51
NEK3P51956 AC139103.1-201ENST00000534696 1030 ntBASIC5.63□□□□□ -1.51
NEK3P51956 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NEK3P51956 LSM3P2-201ENST00000551246 273 ntBASIC5.63□□□□□ -1.51
NEK3P51956 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.63□□□□□ -1.51
NEK3P51956 AL442163.2-201ENST00000553912 710 ntBASIC5.63□□□□□ -1.51
NEK3P51956 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NEK3P51956 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.63□□□□□ -1.51
NEK3P51956 MIR4666A-201ENST00000580160 79 ntBASIC5.63□□□□□ -1.51
NEK3P51956 MIR7853-201ENST00000584820 132 ntBASIC5.63□□□□□ -1.51
NEK3P51956 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
NEK3P51956 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.63□□□□□ -1.51
NEK3P51956 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NEK3P51956 AC012616.1-201ENST00000600294 197 ntBASIC5.63□□□□□ -1.51
NEK3P51956 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.63□□□□□ -1.51
NEK3P51956 AC010245.2-201ENST00000606908 1167 ntBASIC5.63□□□□□ -1.51
NEK3P51956 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.63□□□□□ -1.51
NEK3P51956 AC007204.2-201ENST00000615022 616 ntBASIC5.63□□□□□ -1.51
NEK3P51956 AC009318.3-201ENST00000616916 503 ntBASIC5.63□□□□□ -1.51
NEK3P51956 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.63□□□□□ -1.51
NEK3P51956 AC132068.1-201ENST00000623805 459 ntBASIC5.63□□□□□ -1.51
NEK3P51956 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.63□□□□□ -1.51
NEK3P51956 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEK3P51956 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.63□□□□□ -1.51
NEK3P51956 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEK3P51956 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NEK3P51956 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.63□□□□□ -1.51
NEK3P51956 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEK3P51956 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
NEK3P51956 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEK3P51956 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEK3P51956 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NEK3P51956 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NEK3P51956 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.62□□□□□ -1.51
NEK3P51956 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NEK3P51956 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
NEK3P51956 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
NEK3P51956 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NEK3P51956 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NEK3P51956 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.62□□□□□ -1.51
NEK3P51956 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.62□□□□□ -1.51
NEK3P51956 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
NEK3P51956 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
NEK3P51956 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NEK3P51956 AC092681.1-201ENST00000297369 291 ntBASIC5.62□□□□□ -1.51
NEK3P51956 RNA5SP234-201ENST00000363916 119 ntBASIC5.62□□□□□ -1.51
NEK3P51956 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NEK3P51956 MIR551A-201ENST00000385042 96 ntBASIC5.62□□□□□ -1.51
NEK3P51956 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.62□□□□□ -1.51
NEK3P51956 AC027644.1-201ENST00000419595 298 ntBASIC5.62□□□□□ -1.51
NEK3P51956 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.62□□□□□ -1.51
NEK3P51956 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.62□□□□□ -1.51
NEK3P51956 RPL12P46-201ENST00000436610 195 ntBASIC5.62□□□□□ -1.51
NEK3P51956 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.62□□□□□ -1.51
NEK3P51956 NANOGP9-201ENST00000439890 892 ntBASIC5.62□□□□□ -1.51
NEK3P51956 HMGB3P6-201ENST00000444896 598 ntBASIC5.62□□□□□ -1.51
NEK3P51956 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.62□□□□□ -1.51
NEK3P51956 AL591623.2-201ENST00000449978 222 ntBASIC5.62□□□□□ -1.51
NEK3P51956 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.62□□□□□ -1.51
NEK3P51956 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.62□□□□□ -1.51
NEK3P51956 OR52A4P-201ENST00000472867 958 ntBASIC5.62□□□□□ -1.51
NEK3P51956 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.62□□□□□ -1.51
NEK3P51956 AC015724.1-201ENST00000478577 156 ntBASIC5.62□□□□□ -1.51
NEK3P51956 RN7SL629P-201ENST00000489622 285 ntBASIC5.62□□□□□ -1.51
NEK3P51956 RPS12P31-201ENST00000491419 398 ntBASIC5.62□□□□□ -1.51
NEK3P51956 RPS4XP14-201ENST00000493072 781 ntBASIC5.62□□□□□ -1.51
NEK3P51956 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.62□□□□□ -1.51
NEK3P51956 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.62□□□□□ -1.51
NEK3P51956 AC021106.1-201ENST00000509020 1058 ntBASIC5.62□□□□□ -1.51
NEK3P51956 RNU6-416P-201ENST00000516265 103 ntBASIC5.62□□□□□ -1.51
NEK3P51956 AC092709.1-201ENST00000521355 1045 ntBASIC5.62□□□□□ -1.51
NEK3P51956 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.62□□□□□ -1.51
NEK3P51956 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.62□□□□□ -1.51
NEK3P51956 AP001372.4-201ENST00000524889 472 ntBASIC5.62□□□□□ -1.51
NEK3P51956 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.62□□□□□ -1.51
NEK3P51956 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.62□□□□□ -1.51
NEK3P51956 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.62□□□□□ -1.51
NEK3P51956 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.62□□□□□ -1.51
NEK3P51956 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NEK3P51956 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NEK3P51956 MTCO2P2-201ENST00000591258 225 ntBASIC5.62□□□□□ -1.51
NEK3P51956 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.62□□□□□ -1.51
NEK3P51956 AL160237.3-201ENST00000604114 1013 ntBASIC5.62□□□□□ -1.51
NEK3P51956 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.62□□□□□ -1.51
NEK3P51956 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NEK3P51956 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.62□□□□□ -1.51
NEK3P51956 AC025574.2-201ENST00000615621 514 ntBASIC5.62□□□□□ -1.51
NEK3P51956 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
NEK3P51956 AC015804.1-201ENST00000622935 435 ntBASIC5.62□□□□□ -1.51
NEK3P51956 AP003072.4-201ENST00000624580 310 ntBASIC5.62□□□□□ -1.51
NEK3P51956 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.62□□□□□ -1.51
NEK3P51956 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.62□□□□□ -1.51
NEK3P51956 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
NEK3P51956 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
NEK3P51956 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NEK3P51956 ABCC13-202ENST00000463099 3842 ntBASIC5.62□□□□□ -1.51
NEK3P51956 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NEK3P51956 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms