Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 EIF2S2P2-201ENST00000447161 982 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 RHEBP2-201ENST00000450289 600 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.92□□□□□ -1.62
BRCC3P46736 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.92□□□□□ -1.62
BRCC3P46736 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.92□□□□□ -1.62
BRCC3P46736 AC093267.1-201ENST00000489176 961 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 OR52A4P-203ENST00000498233 1014 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.92□□□□□ -1.62
BRCC3P46736 IGLVIV-65-201ENST00000517313 360 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 AP002981.1-201ENST00000517692 975 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.92□□□□□ -1.62
BRCC3P46736 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCC3P46736 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCC3P46736 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.92□□□□□ -1.62
BRCC3P46736 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
BRCC3P46736 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.92□□□□□ -1.62
BRCC3P46736 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.92□□□□□ -1.62
BRCC3P46736 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCC3P46736 AL391597.1-201ENST00000618707 694 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCC3P46736 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCC3P46736 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCC3P46736 AL391684.1-202ENST00000641293 1636 ntBASIC4.92□□□□□ -1.62
BRCC3P46736 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCC3P46736 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCC3P46736 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCC3P46736 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.92□□□□□ -1.62
BRCC3P46736 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCC3P46736 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCC3P46736 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCC3P46736 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCC3P46736 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRCC3P46736 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
BRCC3P46736 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.91□□□□□ -1.62
BRCC3P46736 AC135352.1-201ENST00000506173 1418 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCC3P46736 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRCC3P46736 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCC3P46736 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
BRCC3P46736 RPL23AP59-201ENST00000399415 461 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCC3P46736 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.91□□□□□ -1.62
BRCC3P46736 CKS1BP6-201ENST00000424932 240 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRCC3P46736 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.91□□□□□ -1.62
BRCC3P46736 Z95152.1-201ENST00000453556 656 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 HMGN1P8-201ENST00000463578 288 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.91□□□□□ -1.62
BRCC3P46736 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.91□□□□□ -1.62
BRCC3P46736 AC098799.3-201ENST00000506095 438 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 PRELID3BP5-201ENST00000508612 460 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 RFPL4AP5-201ENST00000514977 504 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.91□□□□□ -1.62
BRCC3P46736 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.91□□□□□ -1.62
BRCC3P46736 AL121839.1-201ENST00000556233 1185 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
BRCC3P46736 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.91□□□□□ -1.62
BRCC3P46736 AC012409.3-201ENST00000611343 981 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.91□□□□□ -1.62
BRCC3P46736 CCT8P1-201ENST00000413611 1657 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.91□□□□□ -1.62
BRCC3P46736 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCC3P46736 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRCC3P46736 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.91□□□□□ -1.62
BRCC3P46736 AP001642.1-201ENST00000624727 2117 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCC3P46736 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCC3P46736 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCC3P46736 AC025031.4-201ENST00000621248 3271 ntBASIC4.91□□□□□ -1.62
BRCC3P46736 UGT2B26P-201ENST00000508672 1613 ntBASIC4.9□□□□□ -1.62
BRCC3P46736 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRCC3P46736 VN2R3P-201ENST00000422626 1412 ntBASIC4.9□□□□□ -1.62
BRCC3P46736 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
BRCC3P46736 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.9□□□□□ -1.62
BRCC3P46736 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRCC3P46736 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRCC3P46736 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.9□□□□□ -1.62
BRCC3P46736 RNU6-697P-201ENST00000363348 107 ntBASIC4.9□□□□□ -1.63
BRCC3P46736 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
BRCC3P46736 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRCC3P46736 RAB9AP4-201ENST00000415230 609 ntBASIC4.9□□□□□ -1.63
BRCC3P46736 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.9□□□□□ -1.63
BRCC3P46736 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.9□□□□□ -1.63
BRCC3P46736 MTCO1P51-201ENST00000427672 1060 ntBASIC4.9□□□□□ -1.63
BRCC3P46736 NDUFA5P1-201ENST00000433858 341 ntBASIC4.9□□□□□ -1.63
BRCC3P46736 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.9□□□□□ -1.63
BRCC3P46736 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.9□□□□□ -1.63
BRCC3P46736 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BRCC3P46736 AC011276.1-201ENST00000469688 323 ntBASIC4.9□□□□□ -1.63
BRCC3P46736 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.9□□□□□ -1.63
BRCC3P46736 AC083829.1-201ENST00000503756 657 ntBASIC4.9□□□□□ -1.63
BRCC3P46736 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
BRCC3P46736 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BRCC3P46736 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.9□□□□□ -1.63
BRCC3P46736 OR8G5-201ENST00000524943 1041 ntBASIC4.9□□□□□ -1.63
BRCC3P46736 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.9□□□□□ -1.63
BRCC3P46736 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.9□□□□□ -1.63
BRCC3P46736 AC005191.1-201ENST00000603950 358 ntBASIC4.9□□□□□ -1.63
BRCC3P46736 OR7M1P-201ENST00000608946 533 ntBASIC4.9□□□□□ -1.63
BRCC3P46736 MLECP1-201ENST00000615893 709 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms