Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC008953.1-201ENST00000497334 318 ntBASIC5.1□□□□□ -1.59
SSR1P43307 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.1□□□□□ -1.59
SSR1P43307 RNU6-709P-201ENST00000517257 104 ntBASIC5.1□□□□□ -1.59
SSR1P43307 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.1□□□□□ -1.59
SSR1P43307 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.1□□□□□ -1.59
SSR1P43307 AC123912.3-201ENST00000600907 1367 ntBASIC5.1□□□□□ -1.59
SSR1P43307 AC068790.5-201ENST00000602741 355 ntBASIC5.1□□□□□ -1.59
SSR1P43307 MEMO1P5-201ENST00000604810 406 ntBASIC5.1□□□□□ -1.59
SSR1P43307 MIR8069-1-201ENST00000616627 86 ntBASIC5.1□□□□□ -1.59
SSR1P43307 AL022401.1-201ENST00000619498 108 ntBASIC5.1□□□□□ -1.59
SSR1P43307 MIR8069-2-201ENST00000621412 86 ntBASIC5.1□□□□□ -1.59
SSR1P43307 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SSR1P43307 CASC19-206ENST00000641028 1430 ntBASIC5.1□□□□□ -1.59
SSR1P43307 LINC01739-205ENST00000641890 573 ntBASIC5.1□□□□□ -1.59
SSR1P43307 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
SSR1P43307 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.1□□□□□ -1.59
SSR1P43307 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSR1P43307 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.09□□□□□ -1.59
SSR1P43307 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSR1P43307 AC095050.2-201ENST00000510748 1458 ntBASIC5.09□□□□□ -1.59
SSR1P43307 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSR1P43307 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SSR1P43307 SNORA70-201ENST00000384436 135 ntBASIC5.09□□□□□ -1.59
SSR1P43307 RN7SKP273-201ENST00000411392 314 ntBASIC5.09□□□□□ -1.59
SSR1P43307 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.09□□□□□ -1.59
SSR1P43307 VN1R31P-201ENST00000417498 730 ntBASIC5.09□□□□□ -1.59
SSR1P43307 BTG3P1-201ENST00000435859 716 ntBASIC5.09□□□□□ -1.59
SSR1P43307 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.09□□□□□ -1.59
SSR1P43307 RAB9AP5-201ENST00000437794 597 ntBASIC5.09□□□□□ -1.59
SSR1P43307 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.09□□□□□ -1.59
SSR1P43307 RAB9AP2-201ENST00000443911 597 ntBASIC5.09□□□□□ -1.59
SSR1P43307 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.09□□□□□ -1.59
SSR1P43307 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSR1P43307 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.09□□□□□ -1.59
SSR1P43307 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.09□□□□□ -1.59
SSR1P43307 RPL21P71-201ENST00000465598 459 ntBASIC5.09□□□□□ -1.59
SSR1P43307 RN7SL97P-201ENST00000486780 299 ntBASIC5.09□□□□□ -1.59
SSR1P43307 AC109462.1-201ENST00000491087 368 ntBASIC5.09□□□□□ -1.59
SSR1P43307 AC140172.1-201ENST00000502928 141 ntBASIC5.09□□□□□ -1.59
SSR1P43307 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.09□□□□□ -1.59
SSR1P43307 RNA5SP34-201ENST00000516887 130 ntBASIC5.09□□□□□ -1.59
SSR1P43307 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.09□□□□□ -1.59
SSR1P43307 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.09□□□□□ -1.59
SSR1P43307 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.09□□□□□ -1.59
SSR1P43307 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.09□□□□□ -1.59
SSR1P43307 HMGB2P1-201ENST00000591146 634 ntBASIC5.09□□□□□ -1.59
SSR1P43307 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.09□□□□□ -1.59
SSR1P43307 AC015804.1-201ENST00000622935 435 ntBASIC5.09□□□□□ -1.59
SSR1P43307 AL353662.3-201ENST00000625131 237 ntBASIC5.09□□□□□ -1.59
SSR1P43307 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.09□□□□□ -1.59
SSR1P43307 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.09□□□□□ -1.59
SSR1P43307 MARK2P15-201ENST00000432204 2186 ntBASIC5.09□□□□□ -1.59
SSR1P43307 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSR1P43307 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SSR1P43307 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SSR1P43307 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.08□□□□□ -1.6
SSR1P43307 AL359922.3-201ENST00000624779 1670 ntBASIC5.08□□□□□ -1.6
SSR1P43307 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.08□□□□□ -1.6
SSR1P43307 AL672167.1-203ENST00000641299 2975 ntBASIC5.08□□□□□ -1.6
SSR1P43307 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SSR1P43307 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSR1P43307 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SSR1P43307 U8.4-201ENST00000363626 134 ntBASIC5.08□□□□□ -1.6
SSR1P43307 MT-RNR1-201ENST00000389680 954 ntBASIC5.08□□□□□ -1.6
SSR1P43307 AP002530.1-201ENST00000405705 684 ntBASIC5.08□□□□□ -1.6
SSR1P43307 RN7SKP229-201ENST00000410465 302 ntBASIC5.08□□□□□ -1.6
SSR1P43307 RN7SKP177-201ENST00000410567 355 ntBASIC5.08□□□□□ -1.6
SSR1P43307 CKS1BP6-201ENST00000424932 240 ntBASIC5.08□□□□□ -1.6
SSR1P43307 RPL12P28-201ENST00000430852 489 ntBASIC5.08□□□□□ -1.6
SSR1P43307 AL451139.1-201ENST00000434718 346 ntBASIC5.08□□□□□ -1.6
SSR1P43307 PRPF38AP2-201ENST00000438179 851 ntBASIC5.08□□□□□ -1.6
SSR1P43307 RHEBP2-201ENST00000450289 600 ntBASIC5.08□□□□□ -1.6
SSR1P43307 AL445433.1-201ENST00000457507 257 ntBASIC5.08□□□□□ -1.6
SSR1P43307 AC005532.2-201ENST00000467154 373 ntBASIC5.08□□□□□ -1.6
SSR1P43307 AC090142.2-201ENST00000483263 416 ntBASIC5.08□□□□□ -1.6
SSR1P43307 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.08□□□□□ -1.6
SSR1P43307 AC020593.1-201ENST00000507399 299 ntBASIC5.08□□□□□ -1.6
SSR1P43307 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.08□□□□□ -1.6
SSR1P43307 OR51K1P-201ENST00000510214 950 ntBASIC5.08□□□□□ -1.6
SSR1P43307 AC147055.3-201ENST00000510547 851 ntBASIC5.08□□□□□ -1.6
SSR1P43307 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.08□□□□□ -1.6
SSR1P43307 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.08□□□□□ -1.6
SSR1P43307 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.08□□□□□ -1.6
SSR1P43307 MTND2P13-201ENST00000577438 1039 ntBASIC5.08□□□□□ -1.6
SSR1P43307 AP000919.1-201ENST00000582850 985 ntBASIC5.08□□□□□ -1.6
SSR1P43307 MIR6862-1-201ENST00000613016 70 ntBASIC5.08□□□□□ -1.6
SSR1P43307 MIR6862-2-201ENST00000614755 70 ntBASIC5.08□□□□□ -1.6
SSR1P43307 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.08□□□□□ -1.6
SSR1P43307 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.08□□□□□ -1.6
SSR1P43307 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSR1P43307 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSR1P43307 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.08□□□□□ -1.6
SSR1P43307 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSR1P43307 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSR1P43307 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
SSR1P43307 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SSR1P43307 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SSR1P43307 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSR1P43307 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.07□□□□□ -1.6
SSR1P43307 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms