Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.83□□□□□ -1.8
COL8A2P25067 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.83□□□□□ -1.8
COL8A2P25067 AC093840.1-201ENST00000511599 336 ntBASIC3.83□□□□□ -1.8
COL8A2P25067 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.83□□□□□ -1.8
COL8A2P25067 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.83□□□□□ -1.8
COL8A2P25067 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.83□□□□□ -1.8
COL8A2P25067 AP000859.1-201ENST00000525536 307 ntBASIC3.83□□□□□ -1.8
COL8A2P25067 AP000827.1-201ENST00000527814 258 ntBASIC3.83□□□□□ -1.8
COL8A2P25067 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL8A2P25067 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.83□□□□□ -1.8
COL8A2P25067 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.83□□□□□ -1.8
COL8A2P25067 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.83□□□□□ -1.8
COL8A2P25067 AC011944.2-201ENST00000624440 683 ntBASIC3.83□□□□□ -1.8
COL8A2P25067 OR2L1P-202ENST00000641567 1023 ntBASIC3.83□□□□□ -1.8
COL8A2P25067 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.83□□□□□ -1.8
COL8A2P25067 VN2R3P-201ENST00000422626 1412 ntBASIC3.83□□□□□ -1.8
COL8A2P25067 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL8A2P25067 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL8A2P25067 AL355852.1-201ENST00000454081 1771 ntBASIC3.83□□□□□ -1.8
COL8A2P25067 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL8A2P25067 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL8A2P25067 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.83□□□□□ -1.8
COL8A2P25067 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.83□□□□□ -1.8
COL8A2P25067 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL8A2P25067 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL8A2P25067 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL8A2P25067 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL8A2P25067 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.82□□□□□ -1.8
COL8A2P25067 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.82□□□□□ -1.8
COL8A2P25067 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL8A2P25067 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
COL8A2P25067 AL133268.1-201ENST00000405676 1401 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.82□□□□□ -1.8
COL8A2P25067 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL8A2P25067 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL8A2P25067 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.82□□□□□ -1.8
COL8A2P25067 VDAC2P1-201ENST00000399358 958 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 SNRPFP1-201ENST00000414761 252 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.82□□□□□ -1.8
COL8A2P25067 TMSB10P2-201ENST00000416049 131 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.82□□□□□ -1.8
COL8A2P25067 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.82□□□□□ -1.8
COL8A2P25067 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.82□□□□□ -1.8
COL8A2P25067 SETP10-201ENST00000424368 814 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 RPL12P34-201ENST00000424532 479 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.82□□□□□ -1.8
COL8A2P25067 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.82□□□□□ -1.8
COL8A2P25067 CBX1P1-201ENST00000440184 427 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.82□□□□□ -1.8
COL8A2P25067 MRPL48P1-201ENST00000445390 636 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.82□□□□□ -1.8
COL8A2P25067 AL935212.3-201ENST00000450729 284 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 AC108751.2-201ENST00000469993 231 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 AC093267.1-201ENST00000489176 961 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 BTG4P1-201ENST00000510421 183 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 AC005520.3-201ENST00000602874 370 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 MLECP1-201ENST00000615893 709 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 AL731566.2-201ENST00000618971 317 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.82□□□□□ -1.8
COL8A2P25067 MIR6830-201ENST00000636015 70 ntBASIC3.82□□□□□ -1.8
COL8A2P25067 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL8A2P25067 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL8A2P25067 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
COL8A2P25067 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL8A2P25067 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL8A2P25067 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
COL8A2P25067 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL8A2P25067 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL8A2P25067 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.81□□□□□ -1.8
COL8A2P25067 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.81□□□□□ -1.8
COL8A2P25067 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.81□□□□□ -1.8
COL8A2P25067 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL8A2P25067 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL8A2P25067 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL8A2P25067 OR56B2P-201ENST00000317102 954 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL8A2P25067 MTHFD2P5-201ENST00000320415 844 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 AC068538.1-201ENST00000376856 336 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.81□□□□□ -1.8
COL8A2P25067 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL8A2P25067 RNU4-25P-201ENST00000410569 230 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 RN7SKP167-201ENST00000411047 285 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 RN7SKP247-201ENST00000411094 308 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.81□□□□□ -1.8
COL8A2P25067 GAPDHP49-201ENST00000421421 961 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 AC023141.6-201ENST00000429418 337 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.81□□□□□ -1.8
COL8A2P25067 NMNAT1P2-201ENST00000435192 860 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 AL450263.2-201ENST00000439400 589 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.81□□□□□ -1.8
COL8A2P25067 RPL21P133-201ENST00000443666 476 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 RPL23AP43-201ENST00000446445 471 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL8A2P25067 AC104651.2-201ENST00000447549 528 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 RPL23AP24-201ENST00000458203 385 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL8A2P25067 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms