Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.71□□□□□ -1.34
NFKB1P19838 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.71□□□□□ -1.34
NFKB1P19838 RN7SL32P-201ENST00000580514 281 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 MIR3682-201ENST00000581338 84 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 AC011712.1-201ENST00000588959 234 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.71□□□□□ -1.34
NFKB1P19838 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 SNORD96A-201ENST00000606577 79 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.71□□□□□ -1.34
NFKB1P19838 AP004247.3-201ENST00000608682 624 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.71□□□□□ -1.34
NFKB1P19838 AC139792.3-201ENST00000623525 224 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 AC073488.9-201ENST00000631601 754 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.71□□□□□ -1.34
NFKB1P19838 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
NFKB1P19838 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.71□□□□□ -1.34
NFKB1P19838 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.71□□□□□ -1.34
NFKB1P19838 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.71□□□□□ -1.34
NFKB1P19838 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.71□□□□□ -1.34
NFKB1P19838 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.71□□□□□ -1.34
NFKB1P19838 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.71□□□□□ -1.34
NFKB1P19838 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NFKB1P19838 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
NFKB1P19838 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
NFKB1P19838 LINC00561-201ENST00000565815 2738 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NFKB1P19838 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
NFKB1P19838 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NFKB1P19838 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NFKB1P19838 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NFKB1P19838 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NFKB1P19838 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.7□□□□□ -1.34
NFKB1P19838 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.7□□□□□ -1.34
NFKB1P19838 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NFKB1P19838 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.7□□□□□ -1.34
NFKB1P19838 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.7□□□□□ -1.34
NFKB1P19838 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 SNORD81.2-201ENST00000365153 76 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
NFKB1P19838 FDPSP5-201ENST00000399474 1057 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NFKB1P19838 RNA5SP118-201ENST00000410385 109 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 PDCL2P1-201ENST00000419302 352 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.7□□□□□ -1.34
NFKB1P19838 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.7□□□□□ -1.34
NFKB1P19838 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 PSMD10P2-201ENST00000432890 672 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.7□□□□□ -1.34
NFKB1P19838 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.7□□□□□ -1.34
NFKB1P19838 C1DP4-201ENST00000455429 424 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 MTND5P4-201ENST00000514978 288 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 RN7SKP196-201ENST00000516267 345 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 AC008429.2-201ENST00000523057 864 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 AP003080.1-202ENST00000526526 915 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 AC068587.4-201ENST00000533893 186 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.7□□□□□ -1.34
NFKB1P19838 AC008127.2-201ENST00000549925 1075 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 HIF1AP1-201ENST00000553642 175 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 H3F3BP2-201ENST00000583907 357 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 MIR3159-201ENST00000584572 74 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.7□□□□□ -1.34
NFKB1P19838 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 VN1R80P-201ENST00000597126 338 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 AC245052.7-201ENST00000601161 359 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 AL162413.1-201ENST00000603198 110 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.7□□□□□ -1.34
NFKB1P19838 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.7□□□□□ -1.34
NFKB1P19838 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NFKB1P19838 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 AL158801.5-201ENST00000623123 465 ntBASIC6.7□□□□□ -1.34
NFKB1P19838 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.7□□□□□ -1.34
NFKB1P19838 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms