Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ELOCP10-201ENST00000440624 327 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AC097499.1-201ENST00000444277 208 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AC010240.2-201ENST00000445363 1205 ntBASIC6.91□□□□□ -1.3
LIG1P18858 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 RPL23AP60-201ENST00000450011 454 ntBASIC6.91□□□□□ -1.3
LIG1P18858 HMGB1P7-201ENST00000450921 612 ntBASIC6.91□□□□□ -1.3
LIG1P18858 OR52E7P-201ENST00000452394 933 ntBASIC6.91□□□□□ -1.3
LIG1P18858 RPL31P58-201ENST00000469001 379 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.91□□□□□ -1.3
LIG1P18858 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 AC116347.2-201ENST00000514912 523 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.91□□□□□ -1.3
LIG1P18858 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
LIG1P18858 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.91□□□□□ -1.3
LIG1P18858 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.91□□□□□ -1.3
LIG1P18858 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.91□□□□□ -1.3
LIG1P18858 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.91□□□□□ -1.3
LIG1P18858 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.91□□□□□ -1.3
LIG1P18858 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.91□□□□□ -1.3
LIG1P18858 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.91□□□□□ -1.3
LIG1P18858 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 EIF1P6-201ENST00000600054 334 ntBASIC6.91□□□□□ -1.3
LIG1P18858 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.91□□□□□ -1.3
LIG1P18858 ELOCP34-201ENST00000604436 327 ntBASIC6.91□□□□□ -1.3
LIG1P18858 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 AC019131.2-201ENST00000609071 870 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AC092681.3-201ENST00000609463 678 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AL356596.1-201ENST00000624230 379 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AC073593.1-201ENST00000624500 411 ntBASIC6.91□□□□□ -1.3
LIG1P18858 OR5AK4P-201ENST00000635912 903 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AC087821.2-201ENST00000637086 450 ntBASIC6.91□□□□□ -1.3
LIG1P18858 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 VN2R3P-201ENST00000422626 1412 ntBASIC6.91□□□□□ -1.3
LIG1P18858 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.91□□□□□ -1.3
LIG1P18858 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
LIG1P18858 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
LIG1P18858 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LIG1P18858 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
LIG1P18858 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.9□□□□□ -1.3
LIG1P18858 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
LIG1P18858 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.9□□□□□ -1.3
LIG1P18858 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.9□□□□□ -1.3
LIG1P18858 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.3
LIG1P18858 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LIG1P18858 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LIG1P18858 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
LIG1P18858 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LIG1P18858 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.9□□□□□ -1.3
LIG1P18858 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
LIG1P18858 RNA5SP431-201ENST00000410312 120 ntBASIC6.9□□□□□ -1.3
LIG1P18858 RN7SKP144-201ENST00000411108 279 ntBASIC6.9□□□□□ -1.3
LIG1P18858 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.9□□□□□ -1.3
LIG1P18858 AC245096.1-201ENST00000413104 546 ntBASIC6.9□□□□□ -1.3
LIG1P18858 RPS15AP38-201ENST00000413110 372 ntBASIC6.9□□□□□ -1.3
LIG1P18858 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LIG1P18858 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.9□□□□□ -1.3
LIG1P18858 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.9□□□□□ -1.3
LIG1P18858 CYCSP46-201ENST00000423569 204 ntBASIC6.9□□□□□ -1.3
LIG1P18858 NANOGP4-201ENST00000427230 913 ntBASIC6.9□□□□□ -1.3
LIG1P18858 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.9□□□□□ -1.3
LIG1P18858 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.9□□□□□ -1.3
LIG1P18858 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LIG1P18858 KRT8P51-201ENST00000438938 274 ntBASIC6.9□□□□□ -1.3
LIG1P18858 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.9□□□□□ -1.3
LIG1P18858 MTND2P24-201ENST00000453434 806 ntBASIC6.9□□□□□ -1.3
LIG1P18858 SNRPGP9-201ENST00000456025 225 ntBASIC6.9□□□□□ -1.3
LIG1P18858 AC004924.1-201ENST00000480160 781 ntBASIC6.9□□□□□ -1.3
LIG1P18858 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
LIG1P18858 OR4G11P-201ENST00000492842 939 ntBASIC6.9□□□□□ -1.3
LIG1P18858 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LIG1P18858 ARL2BPP4-201ENST00000506854 471 ntBASIC6.9□□□□□ -1.3
LIG1P18858 HSD3BP3-201ENST00000514706 994 ntBASIC6.9□□□□□ -1.3
LIG1P18858 NPM1P6-201ENST00000521088 871 ntBASIC6.9□□□□□ -1.3
LIG1P18858 SMARCE1P4-201ENST00000523647 241 ntBASIC6.9□□□□□ -1.3
LIG1P18858 MED28P5-201ENST00000528254 438 ntBASIC6.9□□□□□ -1.3
LIG1P18858 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.9□□□□□ -1.3
LIG1P18858 AL845552.1-201ENST00000556820 323 ntBASIC6.9□□□□□ -1.3
LIG1P18858 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.9□□□□□ -1.3
LIG1P18858 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.9□□□□□ -1.3
LIG1P18858 AC009220.3-201ENST00000604318 586 ntBASIC6.9□□□□□ -1.3
LIG1P18858 SNORA74.4-201ENST00000607595 199 ntBASIC6.9□□□□□ -1.3
LIG1P18858 AL591926.1-201ENST00000620542 217 ntBASIC6.9□□□□□ -1.3
LIG1P18858 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.9□□□□□ -1.3
LIG1P18858 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LIG1P18858 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LIG1P18858 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.9□□□□□ -1.3
LIG1P18858 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms