Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC172P0C7W6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC172P0C7W6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCDC172P0C7W6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCDC172P0C7W6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC172P0C7W6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 MIR195-201ENST00000385194 87 ntBASIC5.06□□□□□ -1.6
CCDC172P0C7W6 SNORD96B-201ENST00000386148 79 ntBASIC5.06□□□□□ -1.6
CCDC172P0C7W6 U3.30-201ENST00000391308 210 ntBASIC5.06□□□□□ -1.6
CCDC172P0C7W6 AL589647.1-201ENST00000402485 466 ntBASIC5.06□□□□□ -1.6
CCDC172P0C7W6 RNA5SP104-201ENST00000410989 118 ntBASIC5.06□□□□□ -1.6
CCDC172P0C7W6 AL591848.1-201ENST00000413092 322 ntBASIC5.06□□□□□ -1.6
CCDC172P0C7W6 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 AC147055.3-201ENST00000510547 851 ntBASIC5.06□□□□□ -1.6
CCDC172P0C7W6 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 ATP5J2P6-201ENST00000565203 266 ntBASIC5.06□□□□□ -1.6
CCDC172P0C7W6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 AC004232.3-201ENST00000622977 525 ntBASIC5.06□□□□□ -1.6
CCDC172P0C7W6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 AL031119.1-201ENST00000404707 1879 ntBASIC5.06□□□□□ -1.6
CCDC172P0C7W6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC172P0C7W6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AC104297.1-201ENST00000393779 870 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 Z98745.1-201ENST00000402553 494 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 VN1R31P-201ENST00000417498 730 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 OR2AM1P-201ENST00000422137 422 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AC004448.2-201ENST00000422360 586 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 PDSS1P1-201ENST00000422953 1114 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 RWDD4P2-201ENST00000426392 563 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 RPS6P12-201ENST00000432491 726 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AP000936.3-201ENST00000438127 255 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 H2AFZP5-201ENST00000446960 382 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 TRY2P-201ENST00000448860 689 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AC026348.1-201ENST00000462549 1053 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 RWDD4P1-201ENST00000488019 565 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 RPS4XP18-201ENST00000495480 763 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 CYCSP28-201ENST00000534284 321 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 HMGN2P6-201ENST00000551091 273 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 SNORD39.2-201ENST00000579995 76 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AL391358.1-201ENST00000605342 190 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AC073137.1-201ENST00000605636 634 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AC008966.2-201ENST00000606157 453 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AC020634.1-201ENST00000608701 549 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AC004825.2-201ENST00000616634 455 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AC008725.1-201ENST00000605123 2263 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 EOGT-210ENST00000615922 1931 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 AL442639.1-201ENST00000625030 1899 ntBASIC5.05□□□□□ -1.6
CCDC172P0C7W6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CCDC172P0C7W6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 AL355852.1-201ENST00000454081 1771 ntBASIC5.04□□□□□ -1.6
CCDC172P0C7W6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 RNA5SP507-201ENST00000363603 121 ntBASIC5.04□□□□□ -1.6
CCDC172P0C7W6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 RPL5P19-201ENST00000404228 893 ntBASIC5.04□□□□□ -1.6
CCDC172P0C7W6 RN7SKP267-201ENST00000410381 285 ntBASIC5.04□□□□□ -1.6
CCDC172P0C7W6 RNU4-34P-201ENST00000410431 124 ntBASIC5.04□□□□□ -1.6
CCDC172P0C7W6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 AL645608.4-201ENST00000423619 154 ntBASIC5.04□□□□□ -1.6
CCDC172P0C7W6 AC007559.1-201ENST00000428736 355 ntBASIC5.04□□□□□ -1.6
CCDC172P0C7W6 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC172P0C7W6 NDUFS5P3-201ENST00000450668 321 ntBASIC5.04□□□□□ -1.6
CCDC172P0C7W6 AC243772.1-201ENST00000451620 410 ntBASIC5.04□□□□□ -1.6
CCDC172P0C7W6 MTND6P32-201ENST00000457611 483 ntBASIC5.04□□□□□ -1.6
CCDC172P0C7W6 AC093763.2-201ENST00000505334 1223 ntBASIC5.04□□□□□ -1.6
CCDC172P0C7W6 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms