Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB2P05538 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DQB2P05538 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 MIR3065-201ENST00000390137 79 ntBASIC4.46□□□□□ -1.7
HLA-DQB2P05538 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 CNOT7P1-201ENST00000429006 852 ntBASIC4.46□□□□□ -1.7
HLA-DQB2P05538 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.46□□□□□ -1.7
HLA-DQB2P05538 RN7SL41P-201ENST00000476144 297 ntBASIC4.46□□□□□ -1.7
HLA-DQB2P05538 RN7SL459P-201ENST00000481078 302 ntBASIC4.46□□□□□ -1.7
HLA-DQB2P05538 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 RPS27AP16-201ENST00000492222 470 ntBASIC4.46□□□□□ -1.7
HLA-DQB2P05538 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 ATP1B1P1-201ENST00000509767 915 ntBASIC4.46□□□□□ -1.7
HLA-DQB2P05538 AC021146.3-201ENST00000511911 260 ntBASIC4.46□□□□□ -1.7
HLA-DQB2P05538 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.46□□□□□ -1.7
HLA-DQB2P05538 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 AC068790.4-201ENST00000602474 263 ntBASIC4.46□□□□□ -1.7
HLA-DQB2P05538 AC079587.1-201ENST00000603846 277 ntBASIC4.46□□□□□ -1.7
HLA-DQB2P05538 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 AC025031.4-201ENST00000621248 3271 ntBASIC4.46□□□□□ -1.7
HLA-DQB2P05538 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQB2P05538 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 OR5P1P-201ENST00000299512 925 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 RN7SKP199-201ENST00000410325 305 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 MIR1911-201ENST00000410783 80 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 AC009237.10-201ENST00000414112 510 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 CDH12P4-201ENST00000517835 295 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 CDH12P3-201ENST00000517935 295 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 CDH12P1-201ENST00000518435 295 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 OR5BC1P-201ENST00000529327 739 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 AL390334.1-201ENST00000556395 450 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 AC008759.1-201ENST00000589783 983 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 AC008745.1-201ENST00000604064 271 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 AL138721.1-201ENST00000616756 179 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 FP325313.1-201ENST00000638228 703 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 CDY11P-201ENST00000447168 1651 ntBASIC4.45□□□□□ -1.7
HLA-DQB2P05538 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQB2P05538 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 IL6STP1-201ENST00000346911 1020 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 MIR331-201ENST00000362302 94 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 RNA5SP447-201ENST00000363749 119 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AL583835.1-201ENST00000399570 407 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 HDGFP1-201ENST00000405943 252 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 SNORA11B-201ENST00000408175 129 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 RPS27AP7-201ENST00000422792 455 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 RPL12P28-201ENST00000430852 489 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQB2P05538 RPL35AP15-201ENST00000468042 339 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 AC013356.1-201ENST00000489027 564 ntBASIC4.44□□□□□ -1.7
HLA-DQB2P05538 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms