Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC090013.1-201ENST00000485147 480 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC139783.2-201ENST00000504847 1145 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 RNA5SP446-201ENST00000515955 82 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC090281.1-201ENST00000523019 276 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 UBTFL9-201ENST00000534504 1148 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC004825.1-201ENST00000555068 586 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC073111.2-201ENST00000605657 1075 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC019131.2-201ENST00000609071 870 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 MIR6837-201ENST00000620884 64 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AP002505.2-201ENST00000623585 696 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AP001486.2-201ENST00000561652 5113 ntBASIC3.53□□□□□ -1.85
HLA-DQA1P01909 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.53□□□□□ -1.85
HLA-DQA1P01909 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 RNU1-44P-201ENST00000384453 163 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 SNORD65-201ENST00000391079 73 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 ST13P16-201ENST00000401760 781 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AL136116.2-201ENST00000404020 785 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 RPL23AP48-201ENST00000406913 488 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AL390774.1-201ENST00000411924 246 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AP000534.2-201ENST00000412729 568 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 RPL7P57-201ENST00000423238 740 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 RPL23AP4-201ENST00000427757 463 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 RPL23AP25-201ENST00000430973 463 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AL133244.1-201ENST00000456007 258 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 RPS27AP2-201ENST00000457576 465 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 RN7SL214P-201ENST00000487317 265 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AC010350.1-201ENST00000504908 231 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 RNU6-941P-201ENST00000516346 108 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 FKBP1BP1-201ENST00000553366 325 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AL049779.2-201ENST00000553847 315 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AL031666.3-201ENST00000609320 1006 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 MIR6768-201ENST00000610734 72 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AC007204.2-201ENST00000615022 616 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AC008115.4-201ENST00000619780 775 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AL023881.1-201ENST00000621088 301 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AP003499.2-201ENST00000624100 483 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 AC018529.3-201ENST00000624212 2254 ntBASIC3.52□□□□□ -1.85
HLA-DQA1P01909 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HLA-DQA1P01909 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 AL450326.2-201ENST00000421913 1962 ntBASIC3.51□□□□□ -1.85
HLA-DQA1P01909 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQA1P01909 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms