Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.61□□□□□ -1.51
CNOT4O95628 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 AC233702.7-202ENST00000582941 211 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.61□□□□□ -1.51
CNOT4O95628 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 VN1R84P-201ENST00000593697 235 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.61□□□□□ -1.51
CNOT4O95628 AC091193.1-201ENST00000604640 448 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 AC091965.4-201ENST00000607691 587 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.61□□□□□ -1.51
CNOT4O95628 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 AC087821.2-201ENST00000637086 450 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CNOT4O95628 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
CNOT4O95628 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CNOT4O95628 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CNOT4O95628 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC104966.1-201ENST00000467010 1464 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 CASC19-206ENST00000641028 1430 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 AL121657.1-201ENST00000327215 531 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 OR4G2P-201ENST00000328113 903 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 RPL11P4-201ENST00000332269 436 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 RN7SKP275-201ENST00000364626 301 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CNOT4O95628 RNU6-317P-201ENST00000384031 107 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.6□□□□□ -1.51
CNOT4O95628 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 RPS24P8-201ENST00000431490 402 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 RPS29P14-201ENST00000431518 171 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 VN1R54P-201ENST00000435210 1049 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 AL645936.1-201ENST00000441979 518 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 RPL5P7-201ENST00000444235 813 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.6□□□□□ -1.51
CNOT4O95628 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 MORF4-201ENST00000447135 971 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.6□□□□□ -1.51
CNOT4O95628 RNU6-1218P-201ENST00000458990 108 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC022415.1-202ENST00000486612 523 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 MYL12BP2-201ENST00000503948 512 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 PRDX4P1-201ENST00000507189 574 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC006499.4-201ENST00000510947 694 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AC109445.1-201ENST00000512356 383 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 AL671862.1-201ENST00000515851 349 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 OR5AK3P-201ENST00000527486 1297 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.6□□□□□ -1.51
CNOT4O95628 NPIPB14P-203ENST00000532298 987 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC044913.1-201ENST00000557200 430 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC084757.1-201ENST00000559987 490 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.6□□□□□ -1.51
CNOT4O95628 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 AC011497.2-201ENST00000600255 639 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.6□□□□□ -1.51
CNOT4O95628 PSMA6P4-201ENST00000603247 718 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AC009220.3-201ENST00000604318 586 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AC124916.2-201ENST00000604416 224 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AC091946.2-201ENST00000606105 291 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AP000894.4-201ENST00000610185 483 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AL352984.2-202ENST00000613699 155 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 MIR7973-1-201ENST00000614683 76 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 MIR7159-201ENST00000620587 66 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.6□□□□□ -1.51
CNOT4O95628 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms