Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.7□□□□□ -1.66
SSX4O60224 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX4O60224 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.7□□□□□ -1.66
SSX4O60224 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 MIR4311-201ENST00000580794 100 ntBASIC4.7□□□□□ -1.66
SSX4O60224 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 AP003117.1-201ENST00000602771 554 ntBASIC4.7□□□□□ -1.66
SSX4O60224 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 AL445222.1-201ENST00000607259 628 ntBASIC4.7□□□□□ -1.66
SSX4O60224 AL353600.1-201ENST00000608148 251 ntBASIC4.7□□□□□ -1.66
SSX4O60224 AP000240.1-201ENST00000609910 452 ntBASIC4.7□□□□□ -1.66
SSX4O60224 AC090510.2-201ENST00000617465 629 ntBASIC4.7□□□□□ -1.66
SSX4O60224 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.7□□□□□ -1.66
SSX4O60224 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.7□□□□□ -1.66
SSX4O60224 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 MTCO1P18-201ENST00000455518 1419 ntBASIC4.7□□□□□ -1.66
SSX4O60224 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.69□□□□□ -1.66
SSX4O60224 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.69□□□□□ -1.66
SSX4O60224 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.69□□□□□ -1.66
SSX4O60224 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.69□□□□□ -1.66
SSX4O60224 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.69□□□□□ -1.66
SSX4O60224 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
SSX4O60224 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 METTL21EP-201ENST00000298105 713 ntBASIC4.69□□□□□ -1.66
SSX4O60224 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 RNU6-468P-201ENST00000384003 109 ntBASIC4.69□□□□□ -1.66
SSX4O60224 RNU6-1257P-201ENST00000384625 110 ntBASIC4.69□□□□□ -1.66
SSX4O60224 RNU6-925P-201ENST00000384629 104 ntBASIC4.69□□□□□ -1.66
SSX4O60224 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.69□□□□□ -1.66
SSX4O60224 RSL24D1P1-201ENST00000404972 493 ntBASIC4.69□□□□□ -1.66
SSX4O60224 AL355615.1-201ENST00000406187 641 ntBASIC4.69□□□□□ -1.66
SSX4O60224 RN7SKP213-201ENST00000410746 298 ntBASIC4.69□□□□□ -1.66
SSX4O60224 AC013404.1-201ENST00000413068 249 ntBASIC4.69□□□□□ -1.66
SSX4O60224 VTA1P1-201ENST00000414044 866 ntBASIC4.69□□□□□ -1.66
SSX4O60224 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.69□□□□□ -1.66
SSX4O60224 MTND2P15-201ENST00000418575 892 ntBASIC4.69□□□□□ -1.66
SSX4O60224 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.69□□□□□ -1.66
SSX4O60224 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.69□□□□□ -1.66
SSX4O60224 DEFB130D-201ENST00000426866 237 ntBASIC4.69□□□□□ -1.66
SSX4O60224 RPL7P33-201ENST00000444159 742 ntBASIC4.69□□□□□ -1.66
SSX4O60224 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.69□□□□□ -1.66
SSX4O60224 RPS26P41-201ENST00000450370 284 ntBASIC4.69□□□□□ -1.66
SSX4O60224 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.69□□□□□ -1.66
SSX4O60224 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.69□□□□□ -1.66
SSX4O60224 TPT1P3-201ENST00000492841 512 ntBASIC4.69□□□□□ -1.66
SSX4O60224 RN7SL808P-201ENST00000496066 299 ntBASIC4.69□□□□□ -1.66
SSX4O60224 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.69□□□□□ -1.66
SSX4O60224 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 AP003717.3-201ENST00000544832 1180 ntBASIC4.69□□□□□ -1.66
SSX4O60224 BNIP3P1-201ENST00000547295 580 ntBASIC4.69□□□□□ -1.66
SSX4O60224 AC025260.1-201ENST00000548858 430 ntBASIC4.69□□□□□ -1.66
SSX4O60224 AL049830.4-201ENST00000555149 351 ntBASIC4.69□□□□□ -1.66
SSX4O60224 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.69□□□□□ -1.66
SSX4O60224 AC090666.1-201ENST00000578241 445 ntBASIC4.69□□□□□ -1.66
SSX4O60224 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.69□□□□□ -1.66
SSX4O60224 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SSX4O60224 uc_338.9-201ENST00000617424 182 ntBASIC4.69□□□□□ -1.66
SSX4O60224 MIR6839-201ENST00000620425 113 ntBASIC4.69□□□□□ -1.66
SSX4O60224 AC007275.1-201ENST00000621243 671 ntBASIC4.69□□□□□ -1.66
SSX4O60224 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.69□□□□□ -1.66
SSX4O60224 AC132825.7-201ENST00000638744 335 ntBASIC4.69□□□□□ -1.66
SSX4O60224 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SSX4O60224 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.69□□□□□ -1.66
SSX4O60224 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SSX4O60224 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.69□□□□□ -1.66
SSX4O60224 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSX4O60224 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.69□□□□□ -1.66
SSX4O60224 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
SSX4O60224 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SSX4O60224 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SSX4O60224 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX4O60224 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSX4O60224 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX4O60224 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms