Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM38O00635 U6.107-201ENST00000637108 79 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TRIM38O00635 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM38O00635 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
TRIM38O00635 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
TRIM38O00635 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 MTND4P31-201ENST00000425607 1343 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM38O00635 MAPK10-338ENST00000641647 3362 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TRIM38O00635 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRIM38O00635 PWAR1-201ENST00000624188 2414 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM38O00635 AC100871.1-201ENST00000507871 1456 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM38O00635 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRIM38O00635 AL121886.1-201ENST00000358609 435 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 RPL7P27-201ENST00000403775 720 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AL590290.1-201ENST00000405336 380 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AL390774.1-201ENST00000411924 246 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM38O00635 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM38O00635 NDUFB4P8-201ENST00000435351 367 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 OR6D1P-201ENST00000436165 939 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AC002542.1-201ENST00000440683 193 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AC245047.2-201ENST00000441060 530 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM38O00635 AL358794.1-201ENST00000445689 381 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AC068135.1-201ENST00000446164 246 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM38O00635 MTND2P8-201ENST00000450555 1025 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 RN7SL222P-201ENST00000476452 299 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 RPL15P21-201ENST00000495592 567 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM38O00635 PRELID3BP7-201ENST00000503606 469 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AC010627.1-201ENST00000503819 1294 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AC021106.1-201ENST00000509020 1058 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM38O00635 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM38O00635 RNU6-276P-201ENST00000516114 96 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 RNA5SP303-201ENST00000516192 130 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
TRIM38O00635 EEF1A1P37-201ENST00000522748 715 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM38O00635 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM38O00635 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM38O00635 AC126177.5-201ENST00000549599 178 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM38O00635 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM38O00635 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM38O00635 AGGF1P5-201ENST00000567900 919 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 MIR4509-3-201ENST00000578671 94 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM38O00635 MIR4509-2-201ENST00000583920 94 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM38O00635 MIR7853-201ENST00000584820 132 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AC055764.2-201ENST00000610089 670 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AL136295.6-201ENST00000610486 658 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AC005332.10-201ENST00000612725 619 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 CYCSP41-201ENST00000616920 296 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 MIR4509-1-201ENST00000618224 94 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM38O00635 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 AC068787.1-201ENST00000623908 691 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM38O00635 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM38O00635 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM38O00635 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM38O00635 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM38O00635 LINC01963-201ENST00000562038 3148 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM38O00635 AC093849.1-201ENST00000563631 2209 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM38O00635 TTC39DP-201ENST00000416781 1688 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 NSRP1P1-201ENST00000444067 1693 ntBASIC5.47□□□□□ -1.53
TRIM38O00635 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
TRIM38O00635 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
TRIM38O00635 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM38O00635 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
TRIM38O00635 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM38O00635 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.46□□□□□ -1.53
TRIM38O00635 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM38O00635 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM38O00635 OR4F13P-202ENST00000560066 2054 ntBASIC5.46□□□□□ -1.53
TRIM38O00635 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM38O00635 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM38O00635 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM38O00635 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM38O00635 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
TRIM38O00635 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM38O00635 AC096921.1-201ENST00000411661 375 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 AC092745.2-202ENST00000411880 369 ntBASIC5.46□□□□□ -1.54
TRIM38O00635 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms