Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RN7SL610P-201ENST00000463845 291 ntBASIC5.11□□□□□ -1.59
O00370 AP000942.1-201ENST00000463969 747 ntBASIC5.11□□□□□ -1.59
O00370 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.11□□□□□ -1.59
O00370 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.11□□□□□ -1.59
O00370 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.11□□□□□ -1.59
O00370 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.11□□□□□ -1.59
O00370 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.11□□□□□ -1.59
O00370 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.11□□□□□ -1.59
O00370 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.11□□□□□ -1.59
O00370 BRD9P1-201ENST00000529855 560 ntBASIC5.11□□□□□ -1.59
O00370 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.11□□□□□ -1.59
O00370 AC087888.1-201ENST00000550884 1254 ntBASIC5.11□□□□□ -1.59
O00370 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.11□□□□□ -1.59
O00370 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.11□□□□□ -1.59
O00370 AC093249.4-201ENST00000564755 259 ntBASIC5.11□□□□□ -1.59
O00370 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.11□□□□□ -1.59
O00370 AC022726.1-201ENST00000587475 207 ntBASIC5.11□□□□□ -1.59
O00370 AL031320.1-201ENST00000604177 357 ntBASIC5.11□□□□□ -1.59
O00370 AC005084.1-201ENST00000605160 304 ntBASIC5.11□□□□□ -1.59
O00370 HMGB1P51-201ENST00000605166 638 ntBASIC5.11□□□□□ -1.59
O00370 RPL21P136-201ENST00000605378 396 ntBASIC5.11□□□□□ -1.59
O00370 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.11□□□□□ -1.59
O00370 AL353600.1-201ENST00000608148 251 ntBASIC5.11□□□□□ -1.59
O00370 AC004948.1-201ENST00000609858 672 ntBASIC5.11□□□□□ -1.59
O00370 DDX18P5-201ENST00000534547 1306 ntBASIC5.11□□□□□ -1.59
O00370 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
O00370 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.11□□□□□ -1.59
O00370 NCLP2-201ENST00000416078 1462 ntBASIC5.11□□□□□ -1.59
O00370 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.11□□□□□ -1.59
O00370 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
O00370 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
O00370 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.11□□□□□ -1.59
O00370 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
O00370 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
O00370 AL121950.1-201ENST00000624993 2077 ntBASIC5.11□□□□□ -1.59
O00370 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
O00370 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.1□□□□□ -1.59
O00370 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
O00370 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.1□□□□□ -1.59
O00370 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
O00370 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
O00370 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.1□□□□□ -1.59
O00370 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
O00370 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
O00370 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
O00370 SNORA27.3-201ENST00000364937 134 ntBASIC5.1□□□□□ -1.59
O00370 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.1□□□□□ -1.59
O00370 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.1□□□□□ -1.59
O00370 MIR937-201ENST00000401271 86 ntBASIC5.1□□□□□ -1.59
O00370 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.1□□□□□ -1.59
O00370 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
O00370 U3.35-201ENST00000408405 208 ntBASIC5.1□□□□□ -1.59
O00370 RNA5SP113-201ENST00000410486 84 ntBASIC5.1□□□□□ -1.59
O00370 AL512504.1-201ENST00000415494 778 ntBASIC5.1□□□□□ -1.59
O00370 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.1□□□□□ -1.59
O00370 AC104837.2-201ENST00000427236 424 ntBASIC5.1□□□□□ -1.59
O00370 OR2B7P-201ENST00000429302 934 ntBASIC5.1□□□□□ -1.59
O00370 ZFAND6P1-201ENST00000434138 605 ntBASIC5.1□□□□□ -1.59
O00370 AL451139.1-201ENST00000434718 346 ntBASIC5.1□□□□□ -1.59
O00370 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.1□□□□□ -1.59
O00370 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.1□□□□□ -1.59
O00370 AL450263.2-201ENST00000439400 589 ntBASIC5.1□□□□□ -1.59
O00370 TXNP2-201ENST00000443918 295 ntBASIC5.1□□□□□ -1.59
O00370 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.1□□□□□ -1.59
O00370 MRPL48P1-201ENST00000445390 636 ntBASIC5.1□□□□□ -1.59
O00370 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.1□□□□□ -1.59
O00370 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.1□□□□□ -1.59
O00370 AC132825.1-201ENST00000463573 2247 ntBASIC5.1□□□□□ -1.59
O00370 AC063943.1-201ENST00000465434 453 ntBASIC5.1□□□□□ -1.59
O00370 RN7SL809P-201ENST00000482040 297 ntBASIC5.1□□□□□ -1.59
O00370 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.1□□□□□ -1.59
O00370 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.1□□□□□ -1.59
O00370 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.1□□□□□ -1.59
O00370 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.1□□□□□ -1.59
O00370 OR5D15P-201ENST00000531671 942 ntBASIC5.1□□□□□ -1.59
O00370 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
O00370 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.1□□□□□ -1.59
O00370 AC074029.2-201ENST00000551045 634 ntBASIC5.1□□□□□ -1.59
O00370 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.1□□□□□ -1.59
O00370 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.1□□□□□ -1.59
O00370 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.1□□□□□ -1.59
O00370 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.1□□□□□ -1.59
O00370 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.1□□□□□ -1.59
O00370 MIR5699-201ENST00000578903 90 ntBASIC5.1□□□□□ -1.59
O00370 MIR3934-201ENST00000579806 107 ntBASIC5.1□□□□□ -1.59
O00370 BNIP3P32-201ENST00000600015 554 ntBASIC5.1□□□□□ -1.59
O00370 AC008536.1-201ENST00000602872 669 ntBASIC5.1□□□□□ -1.59
O00370 MIR6730-201ENST00000622213 67 ntBASIC5.1□□□□□ -1.59
O00370 AC012414.7-202ENST00000622705 1090 ntBASIC5.1□□□□□ -1.59
O00370 AL356094.1-201ENST00000624663 1212 ntBASIC5.1□□□□□ -1.59
O00370 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.1□□□□□ -1.59
O00370 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.1□□□□□ -1.59
O00370 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
O00370 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.1□□□□□ -1.59
O00370 MAPK10-320ENST00000641462 6696 ntBASIC5.1□□□□□ -1.59
O00370 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
O00370 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms