Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 TFP1-202ENST00000475455 1573 ntBASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 TSPY15P-201ENST00000457163 923 ntBASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 AC004264.1-201ENST00000608354 794 ntBASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 NBPF21P-201ENST00000425093 1451 ntBASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB11Q9Y5F2 AC009237.14-201ENST00000609975 1594 ntBASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 AP003071.4-201ENST00000562276 1284 ntBASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHB11Q9Y5F2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 TMEM179-206ENST00000616017 1645 ntBASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 MMP23A-201ENST00000234610 1017 ntBASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB11Q9Y5F2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 HTR7P1-201ENST00000538670 1336 ntBASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms