Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 AC090164.3-201ENST00000610780 2143 ntBASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.91■□□□□ 0.14
RCL1Q9Y2P8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 KRT18P20-201ENST00000548986 1279 ntBASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCL1Q9Y2P8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 PCDHB18P-201ENST00000524813 2368 ntBASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 MIR939-201ENST00000401314 82 ntBASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 MIR6084-201ENST00000622012 110 ntBASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 HTR7P1-202ENST00000624664 4411 ntBASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCL1Q9Y2P8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 WIZP1-201ENST00000531444 2299 ntBASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 EDA-201ENST00000338901 1233 ntBASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.88■□□□□ 0.13
RCL1Q9Y2P8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms