Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NOD1Q9Y239 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.47■■□□□ 1.03
NOD1Q9Y239 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NOD1Q9Y239 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NOD1Q9Y239 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NOD1Q9Y239 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NOD1Q9Y239 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NOD1Q9Y239 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NOD1Q9Y239 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.46■■□□□ 1.03
NOD1Q9Y239 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NOD1Q9Y239 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.46■■□□□ 1.03
NOD1Q9Y239 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NOD1Q9Y239 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NOD1Q9Y239 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.46■■□□□ 1.03
NOD1Q9Y239 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.46■■□□□ 1.03
NOD1Q9Y239 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.46■■□□□ 1.03
NOD1Q9Y239 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
NOD1Q9Y239 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NOD1Q9Y239 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.46■■□□□ 1.03
NOD1Q9Y239 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NOD1Q9Y239 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.45■■□□□ 1.03
NOD1Q9Y239 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
NOD1Q9Y239 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NOD1Q9Y239 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NOD1Q9Y239 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 BX119927.1-201ENST00000636596 1552 ntBASIC21.45■■□□□ 1.02
NOD1Q9Y239 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NOD1Q9Y239 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NOD1Q9Y239 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NOD1Q9Y239 AL031133.1-201ENST00000406807 723 ntBASIC21.45■■□□□ 1.02
NOD1Q9Y239 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 AL031432.5-201ENST00000641059 760 ntBASIC21.45■■□□□ 1.02
NOD1Q9Y239 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NOD1Q9Y239 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NOD1Q9Y239 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NOD1Q9Y239 AP001271.2-201ENST00000624018 1556 ntBASIC21.44■■□□□ 1.02
NOD1Q9Y239 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NOD1Q9Y239 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
NOD1Q9Y239 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NOD1Q9Y239 AL353719.1-201ENST00000566847 864 ntBASIC21.44■■□□□ 1.02
NOD1Q9Y239 AC140113.3-201ENST00000605663 199 ntBASIC21.44■■□□□ 1.02
NOD1Q9Y239 MYC-208ENST00000641036 567 ntBASIC21.44■■□□□ 1.02
NOD1Q9Y239 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NOD1Q9Y239 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NOD1Q9Y239 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.44■■□□□ 1.02
NOD1Q9Y239 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NOD1Q9Y239 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.44■■□□□ 1.02
NOD1Q9Y239 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NOD1Q9Y239 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NOD1Q9Y239 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NOD1Q9Y239 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NOD1Q9Y239 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NOD1Q9Y239 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NOD1Q9Y239 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 AC011558.1-201ENST00000623459 338 ntBASIC21.43■■□□□ 1.02
NOD1Q9Y239 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
NOD1Q9Y239 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NOD1Q9Y239 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NOD1Q9Y239 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NOD1Q9Y239 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NOD1Q9Y239 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NOD1Q9Y239 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NOD1Q9Y239 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.42■■□□□ 1.02
NOD1Q9Y239 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.42■■□□□ 1.02
NOD1Q9Y239 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
NOD1Q9Y239 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.42■■□□□ 1.02
NOD1Q9Y239 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
NOD1Q9Y239 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
NOD1Q9Y239 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.42■■□□□ 1.02
NOD1Q9Y239 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.42■■□□□ 1.02
NOD1Q9Y239 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.42■■□□□ 1.02
NOD1Q9Y239 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.42■■□□□ 1.02
NOD1Q9Y239 AL023803.3-201ENST00000615559 522 ntBASIC21.42■■□□□ 1.02
NOD1Q9Y239 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms