Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
GNEQ9Y223 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GNEQ9Y223 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.72■■□□□ 1.07
GNEQ9Y223 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.72■■□□□ 1.07
GNEQ9Y223 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.72■■□□□ 1.07
GNEQ9Y223 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GNEQ9Y223 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.72■■□□□ 1.07
GNEQ9Y223 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.72■■□□□ 1.07
GNEQ9Y223 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.72■■□□□ 1.07
GNEQ9Y223 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GNEQ9Y223 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.72■■□□□ 1.07
GNEQ9Y223 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.72■■□□□ 1.07
GNEQ9Y223 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.72■■□□□ 1.07
GNEQ9Y223 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GNEQ9Y223 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GNEQ9Y223 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.72■■□□□ 1.07
GNEQ9Y223 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GNEQ9Y223 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GNEQ9Y223 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
GNEQ9Y223 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.71■■□□□ 1.07
GNEQ9Y223 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GNEQ9Y223 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GNEQ9Y223 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GNEQ9Y223 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
GNEQ9Y223 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GNEQ9Y223 AL512604.3-201ENST00000569583 964 ntBASIC21.71■■□□□ 1.07
GNEQ9Y223 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
GNEQ9Y223 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.71■■□□□ 1.07
GNEQ9Y223 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.71■■□□□ 1.07
GNEQ9Y223 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.71■■□□□ 1.07
GNEQ9Y223 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.71■■□□□ 1.07
GNEQ9Y223 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
GNEQ9Y223 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
GNEQ9Y223 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GNEQ9Y223 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
GNEQ9Y223 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.71■■□□□ 1.07
GNEQ9Y223 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
GNEQ9Y223 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
GNEQ9Y223 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GNEQ9Y223 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
GNEQ9Y223 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.7■■□□□ 1.06
GNEQ9Y223 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.7■■□□□ 1.06
GNEQ9Y223 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GNEQ9Y223 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GNEQ9Y223 AC092647.4-201ENST00000457211 535 ntBASIC21.7■■□□□ 1.06
GNEQ9Y223 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GNEQ9Y223 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GNEQ9Y223 AL031432.5-201ENST00000641059 760 ntBASIC21.7■■□□□ 1.06
GNEQ9Y223 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.7■■□□□ 1.06
GNEQ9Y223 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
GNEQ9Y223 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.7■■□□□ 1.06
GNEQ9Y223 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.7■■□□□ 1.06
GNEQ9Y223 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GNEQ9Y223 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
GNEQ9Y223 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GNEQ9Y223 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GNEQ9Y223 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GNEQ9Y223 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.69■■□□□ 1.06
GNEQ9Y223 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GNEQ9Y223 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GNEQ9Y223 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.69■■□□□ 1.06
GNEQ9Y223 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.69■■□□□ 1.06
GNEQ9Y223 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.69■■□□□ 1.06
GNEQ9Y223 FAM86EP-206ENST00000510506 987 ntBASIC21.69■■□□□ 1.06
GNEQ9Y223 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
GNEQ9Y223 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.69■■□□□ 1.06
GNEQ9Y223 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GNEQ9Y223 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
GNEQ9Y223 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.69■■□□□ 1.06
GNEQ9Y223 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.69■■□□□ 1.06
GNEQ9Y223 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
GNEQ9Y223 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.69■■□□□ 1.06
GNEQ9Y223 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GNEQ9Y223 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GNEQ9Y223 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GNEQ9Y223 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.69■■□□□ 1.06
GNEQ9Y223 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GNEQ9Y223 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
GNEQ9Y223 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GNEQ9Y223 AP003041.3-201ENST00000527151 707 ntBASIC21.68■■□□□ 1.06
GNEQ9Y223 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.68■■□□□ 1.06
GNEQ9Y223 AL441883.1-201ENST00000566170 1045 ntBASIC21.68■■□□□ 1.06
GNEQ9Y223 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
GNEQ9Y223 AP000550.4-202ENST00000639755 178 ntBASIC21.68■■□□□ 1.06
GNEQ9Y223 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GNEQ9Y223 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GNEQ9Y223 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.68■■□□□ 1.06
GNEQ9Y223 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.68■■□□□ 1.06
GNEQ9Y223 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
GNEQ9Y223 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GNEQ9Y223 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
GNEQ9Y223 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.68■■□□□ 1.06
GNEQ9Y223 AC007375.3-201ENST00000600936 2314 ntBASIC21.67■■□□□ 1.06
GNEQ9Y223 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GNEQ9Y223 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
GNEQ9Y223 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms