Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 AC068338.2-201ENST00000563278 1430 ntBASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 C2orf69P4-201ENST00000565394 541 ntBASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 AC069236.1-201ENST00000604339 616 ntBASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 AL589743.5-201ENST00000616611 1050 ntBASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAMD4AQ9UPU9 TEX21P-204ENST00000641479 1693 ntBASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.18■□□□□ 0.5
SAMD4AQ9UPU9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 AC116351.2-201ENST00000606540 1585 ntBASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 AC079598.2-202ENST00000546624 1451 ntBASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 AL049812.1-201ENST00000432563 2267 ntBASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SAMD4AQ9UPU9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 AC090340.1-201ENST00000620778 4980 ntBASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 AC008694.1-202ENST00000636953 945 ntBASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.16■□□□□ 0.5
SAMD4AQ9UPU9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms