Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 AL158047.1-201ENST00000445918 881 ntBASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 KRT16P5-201ENST00000455284 522 ntBASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PARPBPQ9NWS1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 TUBB8P6-201ENST00000436895 1288 ntBASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 AP006294.2-201ENST00000641667 209 ntBASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PARPBPQ9NWS1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
PARPBPQ9NWS1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PARPBPQ9NWS1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PARPBPQ9NWS1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
PARPBPQ9NWS1 AC112907.3-201ENST00000577781 2400 ntBASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PARPBPQ9NWS1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 AC098590.1-201ENST00000468126 897 ntBASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 KRT18P16-201ENST00000510337 1294 ntBASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms