Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 RPS2P4-201ENST00000476944 856 ntBASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 AL049637.2-201ENST00000641778 930 ntBASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 ZNF815P-204ENST00000434898 1737 ntBASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM248Q9NWD8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 AC113410.3-201ENST00000623366 203 ntBASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM248Q9NWD8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 KRT16P1-201ENST00000399124 1418 ntBASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM248Q9NWD8 AC104417.2-201ENST00000562989 1793 ntBASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 AC093827.2-201ENST00000512654 315 ntBASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 CD177P1-201ENST00000606252 935 ntBASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TMEM248Q9NWD8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TMEM248Q9NWD8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.89■□□□□ 0.78
TMEM248Q9NWD8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 FAM197Y1-201ENST00000421178 764 ntBASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 AC004980.1-204ENST00000429707 299 ntBASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 AL160286.2-201ENST00000567150 934 ntBASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 CR392000.1-201ENST00000624770 1228 ntBASIC19.89■□□□□ 0.77
TMEM248Q9NWD8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms