Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 SDHAP1-207ENST00000440850 2000 ntBASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BLOC1S4Q9NUP1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 KRT16P5-201ENST00000455284 522 ntBASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 AC004264.1-201ENST00000608354 794 ntBASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 AL359736.2-201ENST00000621992 437 ntBASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 HLA-A-209ENST00000638375 975 ntBASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 LINC01465-201ENST00000408887 1940 ntBASIC21.67■■□□□ 1.06
BLOC1S4Q9NUP1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 KRT18P29-201ENST00000397031 1267 ntBASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 AC098590.1-201ENST00000468126 897 ntBASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S4Q9NUP1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S4Q9NUP1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.64■■□□□ 1.06
BLOC1S4Q9NUP1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.64■■□□□ 1.06
BLOC1S4Q9NUP1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
BLOC1S4Q9NUP1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
BLOC1S4Q9NUP1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BLOC1S4Q9NUP1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
BLOC1S4Q9NUP1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms