Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.64■□□□□ 0.57
NECTIN3Q9NQS3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN3Q9NQS3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 LETM1P2-201ENST00000597330 2178 ntBASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 C1QBPP2-201ENST00000528754 825 ntBASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 AC026471.1-201ENST00000564629 3026 ntBASIC18.62■□□□□ 0.57
NECTIN3Q9NQS3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 AL121829.2-201ENST00000620908 328 ntBASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NECTIN3Q9NQS3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 GCSHP5-201ENST00000443090 522 ntBASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 AC142381.4-202ENST00000563973 229 ntBASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 AL121906.2-201ENST00000621597 723 ntBASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 AL359736.2-201ENST00000621992 437 ntBASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 AL023875.1-201ENST00000640777 796 ntBASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms