Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 AP003071.4-201ENST00000562276 1284 ntBASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 AIRN-201ENST00000601203 4374 ntBASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF304Q9HCX3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 NUDT16P1-203ENST00000513809 620 ntBASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ZNF304Q9HCX3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 AL355075.4-201ENST00000554988 638 ntBASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 KRT8P8-201ENST00000434750 1448 ntBASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF304Q9HCX3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
ZNF304Q9HCX3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
ZNF304Q9HCX3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 LINC01521-201ENST00000504184 1943 ntBASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 AL445675.2-201ENST00000620291 557 ntBASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 AC073912.3-201ENST00000624414 853 ntBASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 AL031985.4-201ENST00000642138 673 ntBASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms