Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CRNKL1Q9BZJ0 Z85996.1-201ENST00000494644 937 ntBASIC23.19■■□□□ 1.3
CRNKL1Q9BZJ0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.19■■□□□ 1.3
CRNKL1Q9BZJ0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CRNKL1Q9BZJ0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.19■■□□□ 1.3
CRNKL1Q9BZJ0 AC011298.2-201ENST00000617989 482 ntBASIC23.19■■□□□ 1.3
CRNKL1Q9BZJ0 AC130371.2-201ENST00000619443 611 ntBASIC23.19■■□□□ 1.3
CRNKL1Q9BZJ0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CRNKL1Q9BZJ0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CRNKL1Q9BZJ0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CRNKL1Q9BZJ0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.19■■□□□ 1.3
CRNKL1Q9BZJ0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 AC097493.4-201ENST00000641197 219 ntBASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.18■■□□□ 1.3
CRNKL1Q9BZJ0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 AC012306.2-201ENST00000609350 630 ntBASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 LINC01465-201ENST00000408887 1940 ntBASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRNKL1Q9BZJ0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CRNKL1Q9BZJ0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 AC008040.2-201ENST00000461049 708 ntBASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 AC097488.1-201ENST00000507834 756 ntBASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 AP005242.2-201ENST00000580065 1175 ntBASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 AP000692.2-201ENST00000608391 879 ntBASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CRNKL1Q9BZJ0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.14■■□□□ 1.3
CRNKL1Q9BZJ0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.3
CRNKL1Q9BZJ0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CRNKL1Q9BZJ0 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.14■■□□□ 1.3
CRNKL1Q9BZJ0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CRNKL1Q9BZJ0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.14■■□□□ 1.3
CRNKL1Q9BZJ0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.14■■□□□ 1.29
CRNKL1Q9BZJ0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.14■■□□□ 1.29
CRNKL1Q9BZJ0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRNKL1Q9BZJ0 AC091390.4-202ENST00000476426 537 ntBASIC23.14■■□□□ 1.29
CRNKL1Q9BZJ0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.14■■□□□ 1.29
CRNKL1Q9BZJ0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.14■■□□□ 1.29
CRNKL1Q9BZJ0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRNKL1Q9BZJ0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CRNKL1Q9BZJ0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CRNKL1Q9BZJ0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms