Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
SDF4Q9BRK5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 TREX1-205ENST00000625293 1783 ntBASIC22.57■■□□□ 1.2
SDF4Q9BRK5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
SDF4Q9BRK5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 AL023875.1-201ENST00000640777 796 ntBASIC22.56■■□□□ 1.2
SDF4Q9BRK5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 AC093484.2-201ENST00000580996 2166 ntBASIC22.56■■□□□ 1.2
SDF4Q9BRK5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 KRT8P17-201ENST00000453110 1448 ntBASIC22.56■■□□□ 1.2
SDF4Q9BRK5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SDF4Q9BRK5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 AC005332.7-201ENST00000614046 2005 ntBASIC22.55■■□□□ 1.2
SDF4Q9BRK5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 AC239809.2-201ENST00000415381 517 ntBASIC22.55■■□□□ 1.2
SDF4Q9BRK5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 PRKY-204ENST00000533551 1019 ntBASIC22.55■■□□□ 1.2
SDF4Q9BRK5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 AC098818.2-201ENST00000564925 2320 ntBASIC22.55■■□□□ 1.2
SDF4Q9BRK5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.55■■□□□ 1.2
SDF4Q9BRK5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SDF4Q9BRK5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.54■■□□□ 1.2
SDF4Q9BRK5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SDF4Q9BRK5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms