Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CFAP54Q96N23 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CFAP54Q96N23 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.14■□□□□ 0.66
CFAP54Q96N23 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.14■□□□□ 0.65
CFAP54Q96N23 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.14■□□□□ 0.65
CFAP54Q96N23 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CFAP54Q96N23 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.14■□□□□ 0.65
CFAP54Q96N23 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.14■□□□□ 0.65
CFAP54Q96N23 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP54Q96N23 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.14■□□□□ 0.65
CFAP54Q96N23 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.14■□□□□ 0.65
CFAP54Q96N23 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.14■□□□□ 0.65
CFAP54Q96N23 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP54Q96N23 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP54Q96N23 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.14■□□□□ 0.65
CFAP54Q96N23 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP54Q96N23 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP54Q96N23 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP54Q96N23 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.14■□□□□ 0.65
CFAP54Q96N23 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP54Q96N23 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP54Q96N23 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP54Q96N23 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP54Q96N23 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CFAP54Q96N23 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP54Q96N23 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP54Q96N23 HTR5BP-201ENST00000430851 1154 ntBASIC19.14■□□□□ 0.65
CFAP54Q96N23 AC091304.2-201ENST00000564639 760 ntBASIC19.14■□□□□ 0.65
CFAP54Q96N23 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP54Q96N23 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP54Q96N23 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CFAP54Q96N23 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.13■□□□□ 0.65
CFAP54Q96N23 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.13■□□□□ 0.65
CFAP54Q96N23 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP54Q96N23 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP54Q96N23 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CFAP54Q96N23 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.13■□□□□ 0.65
CFAP54Q96N23 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.13■□□□□ 0.65
CFAP54Q96N23 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP54Q96N23 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP54Q96N23 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP54Q96N23 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP54Q96N23 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP54Q96N23 HLA-J-203ENST00000494367 1087 ntBASIC19.13■□□□□ 0.65
CFAP54Q96N23 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.13■□□□□ 0.65
CFAP54Q96N23 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.13■□□□□ 0.65
CFAP54Q96N23 AL121912.1-201ENST00000603683 238 ntBASIC19.13■□□□□ 0.65
CFAP54Q96N23 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP54Q96N23 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP54Q96N23 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP54Q96N23 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP54Q96N23 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP54Q96N23 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP54Q96N23 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP54Q96N23 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.12■□□□□ 0.65
CFAP54Q96N23 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.12■□□□□ 0.65
CFAP54Q96N23 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CFAP54Q96N23 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CFAP54Q96N23 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP54Q96N23 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP54Q96N23 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.12■□□□□ 0.65
CFAP54Q96N23 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP54Q96N23 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP54Q96N23 AC012615.1-201ENST00000565797 1299 ntBASIC19.12■□□□□ 0.65
CFAP54Q96N23 AP002414.4-201ENST00000589764 1148 ntBASIC19.12■□□□□ 0.65
CFAP54Q96N23 PTBP1P-201ENST00000554374 1601 ntBASIC19.12■□□□□ 0.65
CFAP54Q96N23 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP54Q96N23 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP54Q96N23 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CFAP54Q96N23 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CFAP54Q96N23 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CFAP54Q96N23 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CFAP54Q96N23 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 NEK4P2-201ENST00000580004 1012 ntBASIC19.11■□□□□ 0.65
CFAP54Q96N23 AP001160.2-201ENST00000596071 487 ntBASIC19.11■□□□□ 0.65
CFAP54Q96N23 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CFAP54Q96N23 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CFAP54Q96N23 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 AC242852.2-201ENST00000615738 1807 ntBASIC19.11■□□□□ 0.65
CFAP54Q96N23 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CFAP54Q96N23 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CFAP54Q96N23 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CFAP54Q96N23 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP54Q96N23 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP54Q96N23 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
CFAP54Q96N23 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.1■□□□□ 0.65
CFAP54Q96N23 POLD2P1-201ENST00000511220 997 ntBASIC19.1■□□□□ 0.65
CFAP54Q96N23 AC011498.5-201ENST00000592027 486 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms