Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 MIR663A-201ENST00000385250 93 ntBASIC19.65■□□□□ 0.74
LRRC39Q96DD0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 MIPEPP3-201ENST00000412105 444 ntBASIC19.65■□□□□ 0.74
LRRC39Q96DD0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 AC092118.2-201ENST00000613495 667 ntBASIC19.65■□□□□ 0.74
LRRC39Q96DD0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC39Q96DD0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.64■□□□□ 0.74
LRRC39Q96DD0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.64■□□□□ 0.74
LRRC39Q96DD0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.64■□□□□ 0.73
LRRC39Q96DD0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 CROCCP3-202ENST00000420820 1947 ntBASIC19.64■□□□□ 0.73
LRRC39Q96DD0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
LRRC39Q96DD0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.63■□□□□ 0.73
LRRC39Q96DD0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 DUSP5P2-201ENST00000426873 1033 ntBASIC19.63■□□□□ 0.73
LRRC39Q96DD0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LRRC39Q96DD0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.62■□□□□ 0.73
LRRC39Q96DD0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 YBX1P10-201ENST00000444752 975 ntBASIC19.62■□□□□ 0.73
LRRC39Q96DD0 RPS2P52-201ENST00000469610 820 ntBASIC19.62■□□□□ 0.73
LRRC39Q96DD0 AL121832.2-201ENST00000610979 668 ntBASIC19.62■□□□□ 0.73
LRRC39Q96DD0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 AL121906.2-201ENST00000621597 723 ntBASIC19.62■□□□□ 0.73
LRRC39Q96DD0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRC39Q96DD0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC39Q96DD0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms