Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF4Q92544 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TM9SF4Q92544 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF4Q92544 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF4Q92544 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.37■□□□□ 0.53
TM9SF4Q92544 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF4Q92544 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.37■□□□□ 0.53
TM9SF4Q92544 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
TM9SF4Q92544 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.37■□□□□ 0.53
TM9SF4Q92544 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TM9SF4Q92544 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF4Q92544 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF4Q92544 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF4Q92544 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF4Q92544 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF4Q92544 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TM9SF4Q92544 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
TM9SF4Q92544 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM9SF4Q92544 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.37■□□□□ 0.53
TM9SF4Q92544 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TM9SF4Q92544 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF4Q92544 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF4Q92544 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TM9SF4Q92544 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF4Q92544 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.36■□□□□ 0.53
TM9SF4Q92544 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.36■□□□□ 0.53
TM9SF4Q92544 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF4Q92544 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.36■□□□□ 0.53
TM9SF4Q92544 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.36■□□□□ 0.53
TM9SF4Q92544 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.36■□□□□ 0.53
TM9SF4Q92544 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.36■□□□□ 0.53
TM9SF4Q92544 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF4Q92544 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
TM9SF4Q92544 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.36■□□□□ 0.53
TM9SF4Q92544 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM9SF4Q92544 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM9SF4Q92544 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM9SF4Q92544 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM9SF4Q92544 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM9SF4Q92544 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 FAM197Y1-201ENST00000421178 764 ntBASIC18.35■□□□□ 0.53
TM9SF4Q92544 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM9SF4Q92544 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM9SF4Q92544 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM9SF4Q92544 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM9SF4Q92544 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM9SF4Q92544 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 TCF3P1-201ENST00000423021 1937 ntBASIC18.35■□□□□ 0.53
TM9SF4Q92544 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TM9SF4Q92544 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM9SF4Q92544 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM9SF4Q92544 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM9SF4Q92544 KRT8P20-201ENST00000423953 1409 ntBASIC18.34■□□□□ 0.53
TM9SF4Q92544 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TM9SF4Q92544 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM9SF4Q92544 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM9SF4Q92544 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM9SF4Q92544 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TM9SF4Q92544 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM9SF4Q92544 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TM9SF4Q92544 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.34■□□□□ 0.53
TM9SF4Q92544 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.34■□□□□ 0.53
TM9SF4Q92544 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TM9SF4Q92544 AL353708.3-201ENST00000610272 989 ntBASIC18.34■□□□□ 0.53
TM9SF4Q92544 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.34■□□□□ 0.53
TM9SF4Q92544 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.34■□□□□ 0.53
TM9SF4Q92544 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TM9SF4Q92544 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.33■□□□□ 0.53
TM9SF4Q92544 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TM9SF4Q92544 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TM9SF4Q92544 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TM9SF4Q92544 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TM9SF4Q92544 AC124283.5-201ENST00000624661 1809 ntBASIC18.33■□□□□ 0.53
TM9SF4Q92544 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.33■□□□□ 0.53
TM9SF4Q92544 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM9SF4Q92544 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
TM9SF4Q92544 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM9SF4Q92544 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TM9SF4Q92544 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM9SF4Q92544 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.33■□□□□ 0.52
TM9SF4Q92544 TSPY15P-201ENST00000457163 923 ntBASIC18.33■□□□□ 0.52
TM9SF4Q92544 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM9SF4Q92544 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.33■□□□□ 0.52
TM9SF4Q92544 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TM9SF4Q92544 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.33■□□□□ 0.52
TM9SF4Q92544 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.33■□□□□ 0.52
TM9SF4Q92544 AC012306.2-201ENST00000609350 630 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms