Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 DUT-210ENST00000559935 569 ntTSL 3 BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 AC074051.2-201ENST00000565115 352 ntBASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 FAM197Y3-203ENST00000618346 717 ntBASIC7.94□□□□□ -1.14
SYNE2Q8WXH0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 HCG4-201ENST00000418983 998 ntBASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 PON3-203ENST00000427422 894 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 ELK2AP-201ENST00000392510 1007 ntBASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNE2Q8WXH0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 AC002347.1-201ENST00000569543 541 ntBASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 AC004832.2-201ENST00000426397 482 ntBASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 AP003041.3-201ENST00000527151 707 ntBASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 HIST2H3DP1-201ENST00000401004 416 ntBASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms