Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 AC092647.4-201ENST00000457211 535 ntBASIC19.53■□□□□ 0.72
HMGB4Q8WW32 YBX1P2-201ENST00000489612 999 ntBASIC19.53■□□□□ 0.72
HMGB4Q8WW32 AC010653.2-201ENST00000623505 997 ntBASIC19.53■□□□□ 0.72
HMGB4Q8WW32 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGB4Q8WW32 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 COX11P1-201ENST00000489116 835 ntBASIC19.52■□□□□ 0.72
HMGB4Q8WW32 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 AL160286.2-201ENST00000567150 934 ntBASIC19.52■□□□□ 0.72
HMGB4Q8WW32 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 AC091076.1-201ENST00000610741 619 ntBASIC19.52■□□□□ 0.72
HMGB4Q8WW32 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
HMGB4Q8WW32 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.52■□□□□ 0.71
HMGB4Q8WW32 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGB4Q8WW32 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGB4Q8WW32 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGB4Q8WW32 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HMGB4Q8WW32 AC092338.2-201ENST00000568827 1415 ntBASIC19.51■□□□□ 0.71
HMGB4Q8WW32 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 LINC01465-201ENST00000408887 1940 ntBASIC19.51■□□□□ 0.71
HMGB4Q8WW32 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGB4Q8WW32 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 AP001271.2-201ENST00000624018 1556 ntBASIC19.5■□□□□ 0.71
HMGB4Q8WW32 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 FAM8A6P-201ENST00000407496 1135 ntBASIC19.5■□□□□ 0.71
HMGB4Q8WW32 TSPY5P-201ENST00000426936 936 ntBASIC19.5■□□□□ 0.71
HMGB4Q8WW32 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.5■□□□□ 0.71
HMGB4Q8WW32 TSPY17P-201ENST00000450329 467 ntBASIC19.5■□□□□ 0.71
HMGB4Q8WW32 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 AC141257.4-201ENST00000634557 245 ntBASIC19.5■□□□□ 0.71
HMGB4Q8WW32 AC136944.6-201ENST00000634818 245 ntBASIC19.5■□□□□ 0.71
HMGB4Q8WW32 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.5■□□□□ 0.71
HMGB4Q8WW32 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms