Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SH3RF3Q8TEJ3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.14■■□□□ 1.3
SH3RF3Q8TEJ3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.14■■□□□ 1.3
SH3RF3Q8TEJ3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
SH3RF3Q8TEJ3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
SH3RF3Q8TEJ3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.14■■□□□ 1.3
SH3RF3Q8TEJ3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.14■■□□□ 1.3
SH3RF3Q8TEJ3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.14■■□□□ 1.3
SH3RF3Q8TEJ3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 AL137013.1-201ENST00000432946 1228 ntBASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SH3RF3Q8TEJ3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SH3RF3Q8TEJ3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 FAM87A-204ENST00000613235 858 ntBASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.12■■□□□ 1.29
SH3RF3Q8TEJ3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SH3RF3Q8TEJ3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms