Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 LINC01465-201ENST00000408887 1940 ntBASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCHCR1Q8TD31 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 AC098934.4-201ENST00000564127 592 ntBASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 AC005082.1-201ENST00000413042 2259 ntBASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCHCR1Q8TD31 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 MYC-209ENST00000641252 345 ntBASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCHCR1Q8TD31 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCHCR1Q8TD31 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCHCR1Q8TD31 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms