Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 MIR574-201ENST00000385209 96 ntBASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 BX276092.5-203ENST00000456199 560 ntBASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 AP003041.3-201ENST00000527151 707 ntBASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC168Q8NDH2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 AC079776.4-201ENST00000511039 504 ntBASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 AL139424.1-201ENST00000607572 797 ntBASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC168Q8NDH2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 MIR2861-201ENST00000636310 90 ntBASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC168Q8NDH2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC168Q8NDH2 AL590627.1-203ENST00000421194 1026 ntBASIC16.27■□□□□ 0.19
CCDC168Q8NDH2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC168Q8NDH2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.27■□□□□ 0.19
CCDC168Q8NDH2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC168Q8NDH2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC168Q8NDH2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC168Q8NDH2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC168Q8NDH2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC168Q8NDH2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC168Q8NDH2 LINC01465-201ENST00000408887 1940 ntBASIC16.27■□□□□ 0.19
CCDC168Q8NDH2 KRT18P1-202ENST00000452408 1331 ntBASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 KRT8P8-201ENST00000434750 1448 ntBASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 AL162741.1-201ENST00000565563 1558 ntBASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC168Q8NDH2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms