Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 TSPY15P-201ENST00000457163 923 ntBASIC19.9■□□□□ 0.78
KDM1BQ8NB78 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 REXO1L10P-201ENST00000615707 1290 ntBASIC19.9■□□□□ 0.78
KDM1BQ8NB78 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KDM1BQ8NB78 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
KDM1BQ8NB78 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
KDM1BQ8NB78 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 AC087499.1-201ENST00000418141 1075 ntBASIC19.89■□□□□ 0.77
KDM1BQ8NB78 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KDM1BQ8NB78 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 TMEM179-206ENST00000616017 1645 ntBASIC19.88■□□□□ 0.77
KDM1BQ8NB78 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 UNC93B2-201ENST00000285383 730 ntBASIC19.88■□□□□ 0.77
KDM1BQ8NB78 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 RBM17P1-201ENST00000453646 1190 ntBASIC19.88■□□□□ 0.77
KDM1BQ8NB78 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 AC097493.4-201ENST00000641197 219 ntBASIC19.88■□□□□ 0.77
KDM1BQ8NB78 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KDM1BQ8NB78 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 MMP23A-201ENST00000234610 1017 ntBASIC19.87■□□□□ 0.77
KDM1BQ8NB78 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 AC012306.2-201ENST00000609350 630 ntBASIC19.87■□□□□ 0.77
KDM1BQ8NB78 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.87■□□□□ 0.77
KDM1BQ8NB78 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 FSCN1P1-201ENST00000568912 1481 ntBASIC19.86■□□□□ 0.77
KDM1BQ8NB78 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.86■□□□□ 0.77
KDM1BQ8NB78 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms