Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 CNN2P6-201ENST00000439038 900 ntBASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 AC011767.1-201ENST00000617410 1153 ntBASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 AC093484.2-201ENST00000580996 2166 ntBASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIML2Q8N7C3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 AC231657.2-201ENST00000624556 255 ntBASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIML2Q8N7C3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRIML2Q8N7C3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
TRIML2Q8N7C3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIML2Q8N7C3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIML2Q8N7C3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRIML2Q8N7C3 FZD10-202ENST00000539839 3282 ntBASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 AC006015.1-201ENST00000429970 570 ntBASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 BID-214ENST00000617586 542 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIML2Q8N7C3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 CYP2T1P-201ENST00000432607 1285 ntBASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 CYP2T3P-201ENST00000601990 817 ntBASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIML2Q8N7C3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms