Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPOQ8N3V7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPOQ8N3V7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SYNPOQ8N3V7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SYNPOQ8N3V7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SYNPOQ8N3V7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.81■□□□□ 0.76
SYNPOQ8N3V7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.8■□□□□ 0.76
SYNPOQ8N3V7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 AC141257.4-201ENST00000634557 245 ntBASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 AC136944.6-201ENST00000634818 245 ntBASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 AP000550.4-202ENST00000639755 178 ntBASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SYNPOQ8N3V7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 CA15P1-201ENST00000481698 905 ntBASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 AL023803.3-201ENST00000615559 522 ntBASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SYNPOQ8N3V7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 HOMER2P1-201ENST00000455653 964 ntBASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 AL353719.1-201ENST00000566847 864 ntBASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 AL121956.5-201ENST00000625261 221 ntBASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 AC092720.2-201ENST00000602388 1665 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms