Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00528Q8N1L1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LINC00528Q8N1L1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 AC239809.2-201ENST00000415381 517 ntBASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 LINC01023-201ENST00000606054 436 ntBASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 REXO1L12P-201ENST00000622156 912 ntBASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00528Q8N1L1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms